Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p02350 Brassica napus
A07p24370 Brassica napus
Aa31LG10G13390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4819 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2381 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2384 Anthoceros agrestis
Actinidia11200 Actinidia chinensis
Actinidia32519 Actinidia chinensis
Ah.04g158730 Amaranthus hybridus
AL5G40630 Arabidopsis lyrata
Aqoxy1G01878 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.59ND6F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LGDT7B Arachis hypogaea
AT3G58830 Arabidopsis thaliana
ATR0763G116 Amborella trichopoda
Atru.chr1.3606 Acer truncatum
AUR62027489 Chenopodium quinoa
AUR62033992 Chenopodium quinoa
BcaB02g07496 Brassica carinata
BcaC08g44944 Brassica carinata
BcaC08g44945 Brassica carinata
BolC6t37738H Brassica oleracea
BraA07t30084Z Brassica rapa
C06p25760 Brassica napus
CAN.G1530.4 Capsicum annuum
CAN.G164.23 Capsicum annuum
CAN.G44.13 Capsicum annuum
CAN.G585.52 Capsicum annuum
CAN.G732.7 Capsicum annuum
CANSAT64G2722 Cannabis sativa
CARHR169230 Cardamine hirsuta
Carub.0005s2561 Capsella rubella
Ca_16256_v3 Cicer arietinum L.
CBR_g66789 Chara braunii
Cc05_g09330 Coffea canephora
CDE08G0457 Ceratophyllum demersum
Cfa022913 Carpinus fangiana
Cfa023890 Carpinus fangiana
Ciclev10031950m.g Citrus clementina
CiPaw.03G189200 Carya illinoinensis
ClCG09G022370 Citrullus lanatus
COL.COLO4_33742 Corchorus olitorius
Cpa.g.sc50.79 Carica papaya
Cre04.g219900 Chlamydomonas reinhardtii
CsaV3_6G038020 Cucumis sativus L.
CSS0038062 Camellia sinensis var. sinensis
DCAR_009796 Daucus carota
Dinv31558 Davidia involucrata
Duzib187G1993 Durio zibethinus
ECA233G1750 Erigeron canadensis
EL10Ac8g19235 Beta vulgaris
Eucgr.K01200 Eucalyptus grandis
FAN05G0596 Fragaria x ananassa
FAN09G4115 Fragaria x ananassa
FAN14G2746 Fragaria x ananassa
FvH4_6g38130 Fragaria vesca
Glyma.20G056400 Glycine max
Gohir.A05G378700 Gossypium hirsutum
Gohir.D04G036900 Gossypium hirsutum
Gorai.012G041700 Gossypium raimondii
GSVIVG01000791001 Vitis vinifera
HanXRQChr12g0369761 Helianthus annuus
HanXRQChr13g0387431 Helianthus annuus
Haze_13492 Corylus avellana
Hma1.2p1_0722F.1_g208750 Hydrangea macrophylla
Hma1.2p1_0888F.1_g232810 Hydrangea macrophylla
Lalb_Chr04g0257641 Lupinus albus
Lalb_Chr17g0335961 Lupinus albus
Lj1A625T29 Lonicera japonica
Lj6g0012077 Lotus japonicus
Lsat_1_v5_gn_8_32020 Lactuca sativa
Manes.02G084000 Manihot esculenta
Mapoly0095s0041 Marchantia polymorpha
MCO16G670 Micromonas commoda
MD09G1152800 Malus domestica
MD17G1140200 Malus domestica
Medtr1g046360 Medicago truncatula
Medtr3g079530 Medicago truncatula
MELO3C014464.2 Cucumis melo
Migut.M00513 Erythranthe guttata
MSTRG.14295 Avicennia marina
MSTRG.6754 Avicennia marina
Nitab4.5_0000446g0070 Nicotiana tabacum
Nitab4.5_0001675g0040 Nicotiana tabacum
Nitab4.5_0005557g0010 Nicotiana tabacum
Nitab4.5_0006934g0010 Nicotiana tabacum
Nn6g34386 Nelumbo nucifera
Oeu020065.1 Olea europaea
Oeu040028.1 Olea europaea
Os01g0796500 Oryza sativa ssp. japonica
Peaxi162Scf00111g00031 Petunia axillaris
Peaxi162Scf00807g00219 Petunia axillaris
PGR142G4384 Punica granatum
PGSC0003DMG400007795 Solanum tuberosum
PGSC0003DMG400017343 Solanum tuberosum
Phvul.002G231100 Phaseolus vulgaris
Phvul.005G057920 Phaseolus vulgaris
Potri.002G060600 Populus trichocarpa
Potri.005G201100 Populus trichocarpa
Pp3c4_17380 Physcomitrium patens
PRCOL_00003225 Prasinoderma coloniale
Prupe.3G171400 Prunus persica
Psat5g112320 Pisum sativum
PSO541G3223 Papaver somniferum
PSO675G1578 Papaver somniferum
QL08p044016 Quercus lobata
RcHm_v2.0_Chr2g0105231 Rosa chinensis
RcHm_v2.0_Chr2g0151251 Rosa chinensis
RcHm_v2.0_Chr2g0151351 Rosa chinensis
Rhsim06G0118100 Rhododendron simsii
Sabra02G0049100 Salix brachista
Sabra05G0153000 Salix brachista
SalBow7G1748 Salvia bowleyana
SalBow7G3906 Salvia bowleyana
Sc14g0000770 Simmondsia chinensis
Sed0000049 Sechium edule
SEGI_36348 Sequoiadendron giganteum
SGA_v2.0_scaffold130G34360 Striga asiatica
SGA_v2.0_scaffold70G23671 Striga asiatica
SMO367G0867 Selaginella moellendorffii
Solyc07g055980.3 Solanum lycopersicum
Solyc12g011020.2 Solanum lycopersicum
Sopen07g029330 Solanum pennellii
Sopen12g006380 Solanum pennellii
Sp5g04030 Schrenkiella parvula
TAR627G0895 Trochodendron aralioides
THA.LOC104802275 Tarenaya hassleriana
THA.LOC104803221 Tarenaya hassleriana
Thecc.01G161100 Theobroma cacao
Thhalv10006084m.g Eutrema salsugineum
TPR.G37891 Trifolium pratense
TWI59G0166 Tripterygium wilfordii
unitig_0.g2024 Utricularia gibba
vmacro12452 Vaccinium macrocarpon
VMungo0540G1461 Vigna mungo
VMungo0540G1884 Vigna mungo
Zm00001eb150880 Zea mays

User provided reference genes

Program Settings