Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p25680 Brassica napus
A09p37740 Brassica napus
Aa31sc86G40 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2766 Anthoceros agrestis
Actinidia07591 Actinidia chinensis
Actinidia26133 Actinidia chinensis
Actinidia39471 Actinidia chinensis
Ah.14g089640 Amaranthus hybridus
AL1G41900 Arabidopsis lyrata
AL1G56720 Arabidopsis lyrata
AL3G34760 Arabidopsis lyrata
AL3G47430 Arabidopsis lyrata
Aqoxy1G02351 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.QNV263 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U0Q0B6 Arachis hypogaea
AT1G28320 Arabidopsis thaliana
ATR0752G234 Amborella trichopoda
Atru.chr10.1822_Atru.chr10.1823 Acer truncatum
Atru.chr10.1839_Atru.chr10.1840 Acer truncatum
AUR62014850 Chenopodium quinoa
AUR62017045 Chenopodium quinoa
BcaB07g32447 Brassica carinata
BcaB07g32448 Brassica carinata
BolC3t19753H Brassica oleracea
BolC5t31434H Brassica oleracea
BraA08t34518Z Brassica rapa
BraA09t39286Z Brassica rapa
C05p27200 Brassica napus
CAN.G529.25 Capsicum annuum
CANSAT35G1988 Cannabis sativa
CARHR027810 Cardamine hirsuta
Carub.0001s2677 Capsella rubella
Ca_00349_v3 Cicer arietinum L.
CBR_g49781 Chara braunii
CBR_g49783 Chara braunii
Cc02_g13630 Coffea canephora
CDE05G1605 Ceratophyllum demersum
CDE11G0408 Ceratophyllum demersum
Cfa000508 Carpinus fangiana
Ciclev10014582m.g Citrus clementina
CiPaw.09G062100 Carya illinoinensis
ClCG01G023110 Citrullus lanatus
COL.COLO4_31438 Corchorus olitorius
Cpa.g.sc373.5 Carica papaya
Cpa.g.sc373.8 Carica papaya
Cre12.g548200 Chlamydomonas reinhardtii
CsaV3_6G050250 Cucumis sativus L.
DCAR_004057 Daucus carota
Dinv17333 Davidia involucrata
Duzib235G0140 Durio zibethinus
ECA248G0126 Erigeron canadensis
EL10Ac8g20419 Beta vulgaris
Eucgr.E03258 Eucalyptus grandis
FAN11G1234 Fragaria x ananassa
FAN16G2481 Fragaria x ananassa
FAN21G3099 Fragaria x ananassa
FAN25G1993 Fragaria x ananassa
FvH4_3g08860 Fragaria vesca
Glyma.13G237200 Glycine max
Glyma.15G076300 Glycine max
Gohir.A06G129500 Gossypium hirsutum
Gohir.D06G133500 Gossypium hirsutum
Gorai.010G155400 Gossypium raimondii
GSVIVG01021090001 Vitis vinifera
HanXRQChr01g0004651 Helianthus annuus
Haze_06405 Corylus avellana
Haze_06406 Corylus avellana
Hma1.2p1_0208F.1_g088340 Hydrangea macrophylla
Hma1.2p1_0208F.1_g088350 Hydrangea macrophylla
HPP92_025315 Vanilla planifolia
HPP92_025316 Vanilla planifolia
Hund21211 Selenicereus undatus
Lalb_Chr18g0059461 Lupinus albus
Lj2C290G9 Lonicera japonica
Lj6g0019345 Lotus japonicus
Lsat_1_v5_gn_1_124421 Lactuca sativa
Manes.17G047800 Manihot esculenta
Mapoly0045s0140 Marchantia polymorpha
MapolyY_B0048 Marchantia polymorpha
MBI02_g19356_MAGBIO Magnolia biondii
MBI02_g19358_MAGBIO Magnolia biondii
MBI02_g19359_MAGBIO Magnolia biondii
MBI02_g19360_MAGBIO Magnolia biondii
MBI02_g32442_MAGBIO Magnolia biondii
MBI02_g35618_MAGBIO Magnolia biondii
MBI02_g35619_MAGBIO Magnolia biondii
MBI02_g35620_MAGBIO Magnolia biondii
MBI02_g35622_MAGBIO Magnolia biondii
MCO12G111 Micromonas commoda
MD05G1312100 Malus domestica
MD10G1291600 Malus domestica
Medtr2g014210 Medicago truncatula
MELO3C007272.2 Cucumis melo
Migut.M01122 Erythranthe guttata
Nitab4.5_0002219g0050 Nicotiana tabacum
Nitab4.5_0016285g0010 Nicotiana tabacum
Nn1g04161 Nelumbo nucifera
Oeu029366.1 Olea europaea
Os05g0497700 Oryza sativa ssp. japonica
Os12g0607400 Oryza sativa ssp. japonica
Peaxi162Scf01100g00118 Petunia axillaris
PGR042G0490 Punica granatum
PGSC0003DMG400029731 Solanum tuberosum
Phvul.006G183800 Phaseolus vulgaris
Potri.004G046900 Populus trichocarpa
Potri.011G056100 Populus trichocarpa
Pp3c24_9210 Physcomitrium patens
Prupe.4G050600 Prunus persica
Psat1g203720 Pisum sativum
PSO675G0497 Papaver somniferum
QL05p041669 Quercus lobata
RcHm_v2.0_Chr5g0008891 Rosa chinensis
RcHm_v2.0_Chr5g0008901 Rosa chinensis
Rhsim02G0132600 Rhododendron simsii
Sabra04G0029300 Salix brachista
Sabra05G0135200 Salix brachista
Sabra11G0038100 Salix brachista
SalBow8G0351 Salvia bowleyana
Sc05g0007520 Simmondsia chinensis
Sed0020009 Sechium edule
SEGI_06204 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29699 Striga asiatica
Solyc02g077900.4 Solanum lycopersicum
Sopen02g022750 Solanum pennellii
Sp1g24540 Schrenkiella parvula
TAR629G0889 Trochodendron aralioides
THA.LOC104820553 Tarenaya hassleriana
Thecc.06G183700 Theobroma cacao
Thhalv10006942m.g Eutrema salsugineum
Thhalv10007180m.g Eutrema salsugineum
TPR.G16498 Trifolium pratense
TWI63G0225 Tripterygium wilfordii
unitig_27.g24969 Utricularia gibba
vmacro15920 Vaccinium macrocarpon
vmacro15921 Vaccinium macrocarpon
VMungo0540G1564 Vigna mungo
Zm00001eb291760 Zea mays

User provided reference genes

Program Settings