Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p40820 Brassica napus
A05p30870 Brassica napus
Aa31LG8G5570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis
Actinidia03956 Actinidia chinensis
Actinidia37787 Actinidia chinensis
Ah.01g003710 Amaranthus hybridus
AL3G32110 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea
AT3G18760 Arabidopsis thaliana
ATR1096G006 Amborella trichopoda
Atru.chr7.200 Acer truncatum
AUR62001080 Chenopodium quinoa
AUR62004880 Chenopodium quinoa
AUR62039003 Chenopodium quinoa
BcaB04g19003 Brassica carinata
BcaB06g25926 Brassica carinata
BcaC05g28577 Brassica carinata
BolC3t17269H Brassica oleracea
BolC5t33410H Brassica oleracea
BraA03t13240Z Brassica rapa
BraA05t21929Z Brassica rapa
C03p49710 Brassica napus
C05p46800 Brassica napus
CAN.G1465.11 Capsicum annuum
CAN.G1505.19 Capsicum annuum
CANSAT11G0524 Cannabis sativa
CARHR094150 Cardamine hirsuta
Carub.0003s1855 Capsella rubella
Ca_08945_v3 Cicer arietinum L.
CBR_g37184 Chara braunii
Cc06_g16720 Coffea canephora
CDE02G3819 Ceratophyllum demersum
Cfa020874 Carpinus fangiana
Ciclev10009802m.g Citrus clementina
CiPaw.04G061600 Carya illinoinensis
ClCG10G005100 Citrullus lanatus
Cpa.g.sc20.36 Carica papaya
Cre12.g558000 Chlamydomonas reinhardtii
CsaV3_3G004770 Cucumis sativus L.
CSS0013521 Camellia sinensis var. sinensis
Dinv41416 Davidia involucrata
Duzib128G0941 Durio zibethinus
EL10Ac4g09637 Beta vulgaris
Eucgr.B02192 Eucalyptus grandis
Eucgr.H01228 Eucalyptus grandis
Eucgr.H01921 Eucalyptus grandis
Eucgr.L01073 Eucalyptus grandis
FAN19G2317 Fragaria x ananassa
FAN23G2038 Fragaria x ananassa
FAN26G1041 Fragaria x ananassa
FAN28G1107 Fragaria x ananassa
FvH4_1g01540 Fragaria vesca
Glyma.01G008800 Glycine max
Glyma.16G077600 Glycine max
Gohir.A05G280400 Gossypium hirsutum
Gohir.D05G282200 Gossypium hirsutum
Gorai.009G295600 Gossypium raimondii
GSVIVG01001041001 Vitis vinifera
HanXRQChr10g0314501 Helianthus annuus
Haze_19305 Corylus avellana
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla
HPP92_008634 Vanilla planifolia
Lalb_Chr01g0020901 Lupinus albus
Lj2g0025219 Lotus japonicus
Lj3g0020108 Lotus japonicus
Lj7A451T27 Lonicera japonica
Lsat_1_v5_gn_5_90640 Lactuca sativa
Manes.03G015700 Manihot esculenta
Mapoly0179s0002 Marchantia polymorpha
MBI07_g26347_MAGBIO Magnolia biondii
MBI07_g35858_MAGBIO Magnolia biondii
MCO04G088 Micromonas commoda
MD02G1012200 Malus domestica
MD15G1158000 Malus domestica
MD16G1239100 Malus domestica
Medtr5g037160 Medicago truncatula
Medtr6g088605 Medicago truncatula
Medtr7g103190 Medicago truncatula
MELO3C014176.2 Cucumis melo
Migut.J01281 Erythranthe guttata
MSTRG.19630 Avicennia marina
Nitab4.5_0000914g0010 Nicotiana tabacum
Nitab4.5_0002880g0080 Nicotiana tabacum
Nitab4.5_0003965g0050 Nicotiana tabacum
Nitab4.5_0005975g0020 Nicotiana tabacum
Nn2g11495 Nelumbo nucifera
Nn5g27885 Nelumbo nucifera
Nn8g40117 Nelumbo nucifera
Oeu028785.1 Olea europaea
Oeu040774.1 Olea europaea
Os01g0220300 Oryza sativa ssp. japonica
Peaxi162Scf00083g01117 Petunia axillaris
PGR142G4039 Punica granatum
PGSC0003DMG400023408 Solanum tuberosum
Phvul.004G170400 Phaseolus vulgaris
Potri.018G113200 Populus trichocarpa
Pp3c3_21570 Physcomitrium patens
PRCOL_00001406 Prasinoderma coloniale
Prupe.3G048400 Prunus persica
Prupe.7G253200 Prunus persica
Psat3g037680 Pisum sativum
Psat5g026240 Pisum sativum
PSO210G0346 Papaver somniferum
PSO210G6044 Papaver somniferum
QL02p091555 Quercus lobata
RcHm_v2.0_Chr2g0086501 Rosa chinensis
Rhsim03G0057400 Rhododendron simsii
SalBow1G1736 Salvia bowleyana
SalBow1G6627 Salvia bowleyana
Sc08g0004950 Simmondsia chinensis
Sed0022514 Sechium edule
SEGI_16423 Sequoiadendron giganteum
SGA_v2.0_scaffold336G49163 Striga asiatica
SGA_v2.0_scaffold416G51224 Striga asiatica
SMO146G0230 Selaginella moellendorffii
Solyc02g084380.3 Solanum lycopersicum
Solyc05g054990.3 Solanum lycopersicum
Sopen02g029090 Solanum pennellii
Sopen05g033450 Solanum pennellii
Sp3g16800 Schrenkiella parvula
TAR383G0582 Trochodendron aralioides
THA.LOC104815401 Tarenaya hassleriana
THA.LOC104826572 Tarenaya hassleriana
Thecc.10G171800 Theobroma cacao
Thhalv10021733m.g Eutrema salsugineum
TPR.G10852 Trifolium pratense
TPR.G21379 Trifolium pratense
TPR.G31501 Trifolium pratense
TWI34G2008 Tripterygium wilfordii
unitig_46.g18303 Utricularia gibba
unitig_48.g30288 Utricularia gibba
vmacro07529 Vaccinium macrocarpon
VMungo0464G1149 Vigna mungo
VMungo0464G1592 Vigna mungo
Zm00001eb119770 Zea mays
Zm00001eb338780 Zea mays

User provided reference genes

Program Settings