Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p20420 Brassica napus
A07p41640 Brassica napus
Aa31LG4G6200 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2998 Anthoceros agrestis
Actinidia29770 Actinidia chinensis
Actinidia37955 Actinidia chinensis
Ah.00g000640 Amaranthus hybridus
AL2G36120 Arabidopsis lyrata
Aqoxy5G01095 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KUZ5B2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W1N14J Arachis hypogaea
AT1G76080 Arabidopsis thaliana
ATR0661G503 Amborella trichopoda
Atru.chr13.215 Acer truncatum
AUR62013879 Chenopodium quinoa
AUR62036715 Chenopodium quinoa
BcaC03g15644 Brassica carinata
BcaC08g47294 Brassica carinata
BcaC08g47300 Brassica carinata
BcaC08g47301 Brassica carinata
BolC2t09357H Brassica oleracea
BolC6t40041H Brassica oleracea
BraA02t07074Z Brassica rapa
BraA07t31693Z Brassica rapa
C02p33460 Brassica napus
C02p33470 Brassica napus
C06p50020 Brassica napus
CAN.G311.75 Capsicum annuum
CANSAT64G0481 Cannabis sativa
CARHR069620 Cardamine hirsuta
Carub.0002s2297 Capsella rubella
Ca_13486_v3 Cicer arietinum L.
CBR_g26413 Chara braunii
CBR_g6587 Chara braunii
Cc10_g01120 Coffea canephora
CDE02G2619 Ceratophyllum demersum
Cfa014012 Carpinus fangiana
Ciclev10001692m.g Citrus clementina
CiPaw.07G143500 Carya illinoinensis
CiPaw.08G069300 Carya illinoinensis
ClCG08G014020 Citrullus lanatus
COL.COLO4_26082 Corchorus olitorius
Cpa.g.sc26.263 Carica papaya
Cre14.g624201 Chlamydomonas reinhardtii
CsaV3_2G024440 Cucumis sativus L.
CSS0009264 Camellia sinensis var. sinensis
CSS0034642 Camellia sinensis var. sinensis
DCAR_009514 Daucus carota
Dinv31894 Davidia involucrata
Duzib116G0718 Durio zibethinus
ECA232G2943 Erigeron canadensis
EL10Ac1g02081 Beta vulgaris
Eucgr.F03707 Eucalyptus grandis
FAN15G2092 Fragaria x ananassa
FAN20G0939 Fragaria x ananassa
FAN27G2668 Fragaria x ananassa
FvH4_2g37930 Fragaria vesca
Glyma.14G222500 Glycine max
Gohir.A05G182700 Gossypium hirsutum
Gohir.D05G185700 Gossypium hirsutum
Gorai.009G191100 Gossypium raimondii
HanXRQChr05g0146641 Helianthus annuus
Haze_22711 Corylus avellana
Hma1.2p1_1598F.1_g292970 Hydrangea macrophylla
HPP92_014531 Vanilla planifolia
Hund01723 Selenicereus undatus
Lalb_Chr03g0033571 Lupinus albus
Lj4C17T5 Lonicera japonica
Lj5g0010043 Lotus japonicus
Lj9P400T45 Lonicera japonica
Lsat_1_v5_gn_0_661 Lactuca sativa
Manes.05G142400 Manihot esculenta
Mapoly0024s0029 Marchantia polymorpha
MBI05_g13277_MAGBIO Magnolia biondii
MCO12G363 Micromonas commoda
MCO15G282 Micromonas commoda
MD08G1007500 Malus domestica
MD15G1006700 Malus domestica
Medtr1g026125 Medicago truncatula
MELO3C011340.2 Cucumis melo
Migut.B00054 Erythranthe guttata
Migut.C00901 Erythranthe guttata
MSTRG.25277 Avicennia marina
Nitab4.5_0003030g0070 Nicotiana tabacum
Nn5g30848 Nelumbo nucifera
Oeu007384.1 Olea europaea
Os07g0476900 Oryza sativa ssp. japonica
Peaxi162Scf00174g00813 Petunia axillaris
PGR031G3420 Punica granatum
PGSC0003DMG400009956 Solanum tuberosum
Phvul.001G002100 Phaseolus vulgaris
Potri.002G016401 Populus trichocarpa
Potri.005G245700 Populus trichocarpa
Pp3c13_21520 Physcomitrium patens
PRCOL_00003728 Prasinoderma coloniale
PRCOL_00004342 Prasinoderma coloniale
PRCOL_00006430 Prasinoderma coloniale
Prupe.1G359300 Prunus persica
Prupe.6G111600 Prunus persica
Psat6g000840 Pisum sativum
PSO017G6535 Papaver somniferum
PSO170G2194 Papaver somniferum
PSO170G4881 Papaver somniferum
PSO210G2114 Papaver somniferum
PSO339G4729 Papaver somniferum
PSO648G0024 Papaver somniferum
PSO648G0070 Papaver somniferum
PSO648G0080 Papaver somniferum
PSO795G0001 Papaver somniferum
QL02p012950 Quercus lobata
RcHm_v2.0_Chr6g0303681 Rosa chinensis
Rhsim07G0251100 Rhododendron simsii
Sabra05G0189800 Salix brachista
Sc15g0004660 Simmondsia chinensis
Sed0003076 Sechium edule
SEGI_09368 Sequoiadendron giganteum
SEGI_16012 Sequoiadendron giganteum
SGA_v2.0_scaffold145G36102 Striga asiatica
SGA_v2.0_scaffold58G20340 Striga asiatica
SMO356G0420 Selaginella moellendorffii
SMO364G0660 Selaginella moellendorffii
Solyc04g081970.3 Solanum lycopersicum
Sopen04g035620 Solanum pennellii
Sp5g31200 Schrenkiella parvula
TAR376G1006 Trochodendron aralioides
THA.LOC104811445 Tarenaya hassleriana
Thecc.08G051900 Theobroma cacao
Thhalv10018920m.g Eutrema salsugineum
TPR.G26414 Trifolium pratense
TWI36G0492 Tripterygium wilfordii
TWI56G0240 Tripterygium wilfordii
unitig_749.g13905 Utricularia gibba
vmacro04380 Vaccinium macrocarpon
VMungo0464G0698 Vigna mungo
VMungo0647G1170 Vigna mungo
VMungo1383G3503 Vigna mungo
Zm00001eb319950 Zea mays

User provided reference genes

Program Settings