Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_117.3158 Anthoceros agrestis
Actinidia33983 Actinidia chinensis
Ah.03g134040 Amaranthus hybridus
AL6G22400 Arabidopsis lyrata
Aqoxy3G01649 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CA7SJ1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YB0CZG Arachis hypogaea
AT5G11680 Arabidopsis thaliana
ATR0582G264 Amborella trichopoda
Atru.chr12.1491 Acer truncatum
AUR62008562 Chenopodium quinoa
AUR62033199 Chenopodium quinoa
BcaB01g05468 Brassica carinata
BcaC03g13386 Brassica carinata
BolC2t06481H Brassica oleracea
BolC3t13101H Brassica oleracea
BraA03t09846Z Brassica rapa
C02p05330 Brassica napus
CAN.G282.51 Capsicum annuum
CAN.G39.18 Capsicum annuum
CAN.G619.7 Capsicum annuum
CANSAT25G1757 Cannabis sativa
CARHR201540 Cardamine hirsuta
Carub.0006s1018 Capsella rubella
CBR_g24147 Chara braunii
Cc06_g22650 Coffea canephora
Cc08_g00010 Coffea canephora
Cc10_g16300 Coffea canephora
Cc10_g16310 Coffea canephora
Cc11_g14800 Coffea canephora
CDE05G2269 Ceratophyllum demersum
Cfa020947 Carpinus fangiana
Ciclev10005917m.g Citrus clementina
CiPaw.05G096300 Carya illinoinensis
CiPaw.06G112400 Carya illinoinensis
ClCG10G013180 Citrullus lanatus
COL.COLO4_32213 Corchorus olitorius
Cre03.g189100 Chlamydomonas reinhardtii
CsaV3_3G043430 Cucumis sativus L.
CSS0016097 Camellia sinensis var. sinensis
CSS0031660 Camellia sinensis var. sinensis
DCAR_028131 Daucus carota
Dinv02966 Davidia involucrata
Dinv02968 Davidia involucrata
Duzib128G1380 Durio zibethinus
Duzib177G0503 Durio zibethinus
EL10Ac7g17520 Beta vulgaris
Eucgr.J01702 Eucalyptus grandis
FAN17G0486 Fragaria x ananassa
FvH4_4g21930 Fragaria vesca
Glyma.08G266400 Glycine max
Glyma.16G101200 Glycine max
Gohir.A08G221500 Gossypium hirsutum
Gohir.A13G159151 Gossypium hirsutum
Gohir.D08G238100 Gossypium hirsutum
Gorai.004G253600 Gossypium raimondii
Gorai.013G198700 Gossypium raimondii
GSVIVG01001144001 Vitis vinifera
HanXRQChr01g0012261 Helianthus annuus
HanXRQChr10g0312121 Helianthus annuus
Haze_19383 Corylus avellana
Hma1.2p1_0562F.1_g179050 Hydrangea macrophylla
HPP92_013550 Vanilla planifolia
Hund05398 Selenicereus undatus
Lalb_Chr05g0228961 Lupinus albus
Lalb_Chr05g0228971 Lupinus albus
Lj3A918T40 Lonicera japonica
Lj4g0021292 Lotus japonicus
Lsat_1_v5_gn_1_78160 Lactuca sativa
Lsat_1_v5_gn_4_78441 Lactuca sativa
Lsat_1_v5_gn_5_173840 Lactuca sativa
Manes.08G097600 Manihot esculenta
Mapoly0097s0090 Marchantia polymorpha
MBI07_g41258_MAGBIO Magnolia biondii
MBI11_g04264_MAGBIO Magnolia biondii
MBI11_g04265_MAGBIO Magnolia biondii
MD13G1135700 Malus domestica
MD16G1131300 Malus domestica
Medtr8g070860 Medicago truncatula
MELO3C026760.2 Cucumis melo
Migut.L00595 Erythranthe guttata
Migut.L00899 Erythranthe guttata
MSTRG.8074 Avicennia marina
Nitab4.5_0000069g0230 Nicotiana tabacum
Nitab4.5_0001089g0030 Nicotiana tabacum
Nitab4.5_0004301g0080 Nicotiana tabacum
Nitab4.5_0011777g0020 Nicotiana tabacum
Oeu032685.1 Olea europaea
Os09g0512900 Oryza sativa ssp. japonica
Peaxi162Scf00021g02113 Petunia axillaris
Peaxi162Scf00334g00119 Petunia axillaris
Peaxi162Scf00681g00118 Petunia axillaris
PGR119G0553 Punica granatum
PGSC0003DMG400016363 Solanum tuberosum
PGSC0003DMG400029983 Solanum tuberosum
PGSC0003DMG402032565 Solanum tuberosum
Phvul.003G274200 Phaseolus vulgaris
Potri.001G072600 Populus trichocarpa
Potri.003G158200 Populus trichocarpa
Pp3c7_9270 Physcomitrium patens
Prupe.1G209600 Prunus persica
Psat4g111480 Pisum sativum
PSO017G6046 Papaver somniferum
PSO478G3843 Papaver somniferum
QL03p047013 Quercus lobata
RcHm_v2.0_Chr4g0428141 Rosa chinensis
Rhsim12G0090500 Rhododendron simsii
Sabra01G0051200 Salix brachista
SalBow2G1530 Salvia bowleyana
Sc17g0003450 Simmondsia chinensis
Sed0005404 Sechium edule
Sed0018373 Sechium edule
SEGI_14660 Sequoiadendron giganteum
SEGI_32969 Sequoiadendron giganteum
SMO164G0111 Selaginella moellendorffii
Solyc01g008220.3 Solanum lycopersicum
Solyc02g005603.1 Solanum lycopersicum
Solyc04g009190.3 Solanum lycopersicum
Sopen02g002020 Solanum pennellii
Sopen04g004320 Solanum pennellii
Sp6g31930 Schrenkiella parvula
TAR622G0071 Trochodendron aralioides
THA.LOC104811263 Tarenaya hassleriana
Thecc.05G235200 Theobroma cacao
Thhalv10014678m.g Eutrema salsugineum
TPR.G6115 Trifolium pratense
TWI18G0768 Tripterygium wilfordii
TWI75G1298 Tripterygium wilfordii
unitig_22.g6367 Utricularia gibba
unitig_8.g3112 Utricularia gibba
vmacro16032 Vaccinium macrocarpon
VMungo0251G1277 Vigna mungo
Zm00001eb036000 Zea mays
Zm00001eb052330 Zea mays
Zm00001eb071390 Zea mays
Zm00001eb102600 Zea mays
Zm00001eb318180 Zea mays

User provided reference genes

Program Settings