Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p39910 Brassica napus
Aa31LG7G8600 Aethionema arabicum
Actinidia32298 Actinidia chinensis
Ah.06g194230 Amaranthus hybridus
Ah.16g102020 Amaranthus hybridus
AL1G39240 Arabidopsis lyrata
Aqoxy2G03251 Aquilegia oxysepala
Aqoxy3G03617 Aquilegia oxysepala
Aqoxy5G01020 Aquilegia oxysepala
AT1G26500 Arabidopsis thaliana
ATR0064G072 Amborella trichopoda
Atru.chr11.1653 Acer truncatum
AUR62019298 Chenopodium quinoa
BcaB02g08903 Brassica carinata
BcaB02g08904 Brassica carinata
BcaC07g42763 Brassica carinata
BolC5t31185H Brassica oleracea
BraA09t39490Z Brassica rapa
C05p24510 Brassica napus
CAN.G338.60 Capsicum annuum
CAN.G497.86 Capsicum annuum
CANSAT80G0227 Cannabis sativa
CARHR025470 Cardamine hirsuta
Carub.0001s2452 Capsella rubella
Ca_04951_v3 Cicer arietinum L.
Ca_19328_v3 Cicer arietinum L.
Cc11_g12130 Coffea canephora
CDE07G1979 Ceratophyllum demersum
Ciclev10026992m.g Citrus clementina
Ciclev10033964m.g Citrus clementina
CiPaw.13G042800 Carya illinoinensis
ClCG08G010340 Citrullus lanatus
COL.COLO4_27901 Corchorus olitorius
Cpa.g.sc1.114 Carica papaya
CsaV3_6G032540 Cucumis sativus L.
CsaV3_6G033620 Cucumis sativus L.
CSS0009290 Camellia sinensis var. sinensis
CSS0021919 Camellia sinensis var. sinensis
DCAR_027464 Daucus carota
DCAR_027470 Daucus carota
Dinv34079 Davidia involucrata
Duzib248G0892 Durio zibethinus
ECA246G3879 Erigeron canadensis
EL10Ac4g10254 Beta vulgaris
EL10Ac4g10271 Beta vulgaris
Eucgr.B03161 Eucalyptus grandis
FAN07G1209 Fragaria x ananassa
FAN12G0629 Fragaria x ananassa
FAN17G0216 Fragaria x ananassa
FAN22G2146 Fragaria x ananassa
FvH4_4g30220 Fragaria vesca
Glyma.01G057600 Glycine max
Glyma.02G115700 Glycine max
Glyma.17G203100 Glycine max
Gohir.A09G173100 Gossypium hirsutum
Gohir.D03G178400 Gossypium hirsutum
Gohir.D05G389201 Gossypium hirsutum
Gohir.D09G168800 Gossypium hirsutum
Gohir.D10G255400 Gossypium hirsutum
Gohir.D10G255600 Gossypium hirsutum
Gorai.004G000100 Gossypium raimondii
Gorai.005G269500 Gossypium raimondii
Gorai.006G190400 Gossypium raimondii
Gorai.007G000300 Gossypium raimondii
Gorai.009G455800 Gossypium raimondii
Gorai.010G245800 Gossypium raimondii
GSVIVG01012216001 Vitis vinifera
HanXRQChr12g0375311 Helianthus annuus
Haze_12341 Corylus avellana
Haze_20451 Corylus avellana
Hma1.2p1_0354F.1_g133480 Hydrangea macrophylla
HPP92_001057 Vanilla planifolia
HPP92_001150 Vanilla planifolia
HPP92_001155 Vanilla planifolia
HPP92_009525 Vanilla planifolia
HPP92_009556 Vanilla planifolia
HPP92_026246 Vanilla planifolia
Lalb_Chr10g0098711 Lupinus albus
Lalb_Chr15g0086301 Lupinus albus
Lj2g0008256 Lotus japonicus
Lj3P1030T40 Lonicera japonica
Lsat_1_v5_gn_3_56000 Lactuca sativa
Manes.10G007100 Manihot esculenta
MD09G1267500 Malus domestica
Medtr5g044120 Medicago truncatula
MELO3C011426.2 Cucumis melo
Migut.E00052 Erythranthe guttata
Migut.K01489 Erythranthe guttata
Migut.K01493 Erythranthe guttata
Migut.L00233 Erythranthe guttata
Migut.L00235 Erythranthe guttata
MSTRG.13447 Avicennia marina
Nitab4.5_0000014g0340 Nicotiana tabacum
Nitab4.5_0007438g0010 Nicotiana tabacum
Nn2g11925 Nelumbo nucifera
Nn2g11926 Nelumbo nucifera
Nn4g23403 Nelumbo nucifera
Oeu004580.1 Olea europaea
Oeu025277.2 Olea europaea
Oeu058021.1 Olea europaea
Oeu060946.1 Olea europaea
Os07g0599201 Oryza sativa ssp. japonica
PGR102G2037 Punica granatum
PGR102G2626 Punica granatum
PGSC0003DMG400037705 Solanum tuberosum
Phvul.003G043300 Phaseolus vulgaris
Potri.008G191200 Populus trichocarpa
Potri.016G086100 Populus trichocarpa
Prupe.1G285700 Prunus persica
Psat2g129840 Pisum sativum
Psat3g141440 Pisum sativum
QL03p000909 Quercus lobata
QL03p001266 Quercus lobata
QL11p046082 Quercus lobata
QL11p046209 Quercus lobata
RcHm_v2.0_Chr4g0438541 Rosa chinensis
Rhsim12G0135600 Rhododendron simsii
Sabra16G0092400 Salix brachista
SalBow5G4111 Salvia bowleyana
SalBow8G5094 Salvia bowleyana
Sc04g0007650 Simmondsia chinensis
Sed0021884 Sechium edule
SEGI_24414 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13356 Striga asiatica
SGA_v2.0_scaffold32G13359 Striga asiatica
SGA_v2.0_scaffold63G21630 Striga asiatica
SHI08443 Sapria himalayana
SMO352G0069 Selaginella moellendorffii
Sopen04g001420 Solanum pennellii
Sp1g22250 Schrenkiella parvula
TAR629G1135 Trochodendron aralioides
THA.LOC104808568 Tarenaya hassleriana
Thecc.02G332900 Theobroma cacao
Thhalv10009723m.g Eutrema salsugineum
TWI79G0708 Tripterygium wilfordii
VMungo1215G2844 Vigna mungo
Zm00001eb326760 Zea mays

User provided reference genes

Program Settings