Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p30090 Brassica napus
Aa31LG5G19540 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5247 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.729 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.737 Anthoceros agrestis
Actinidia31994 Actinidia chinensis
Actinidia33632 Actinidia chinensis
AL5G36640 Arabidopsis lyrata
Aqoxy4G02564 Aquilegia oxysepala
Aqoxy5G02842 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2YL4XG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IDH5I9 Arachis hypogaea
AT1G19080 Arabidopsis thaliana
AT3G55490 Arabidopsis thaliana
ATR0481G004 Amborella trichopoda
ATR0568G146 Amborella trichopoda
Atru.chr12.29 Acer truncatum
AUR62022323 Chenopodium quinoa
AUR62034382 Chenopodium quinoa
BcaB08g35316 Brassica carinata
BcaC02g07350 Brassica carinata
BcaC02g07392 Brassica carinata
BcaNung05464 Brassica carinata
BolC4t28280H Brassica oleracea
BraA04t18498Z Brassica rapa
C04p07380 Brassica napus
C04p67770 Brassica napus
CAN.G1489.22 Capsicum annuum
CANSAT56G2799 Cannabis sativa
CARHR135030 Cardamine hirsuta
CARHR159370 Cardamine hirsuta
CARHR165540 Cardamine hirsuta
Carub.0005s2221 Capsella rubella
CBR_g38120 Chara braunii
Cc03_g10740 Coffea canephora
Cc03_g13530 Coffea canephora
CDE04G2394 Ceratophyllum demersum
Cfa001322 Carpinus fangiana
Cfa027228 Carpinus fangiana
Ciclev10033435m.g Citrus clementina
CiPaw.08G091200 Carya illinoinensis
ClCG11G006160 Citrullus lanatus
COL.COLO4_25718 Corchorus olitorius
Cpa.g.sc19.176 Carica papaya
Cre06.g251750 Chlamydomonas reinhardtii
CsaV3_6G001830 Cucumis sativus L.
CSS0006168 Camellia sinensis var. sinensis
CSS0006460 Camellia sinensis var. sinensis
DCAR_023625 Daucus carota
DCAR_026757 Daucus carota
Dinv16155 Davidia involucrata
Duzib114G0170 Durio zibethinus
Duzib128G1619 Durio zibethinus
ECA233G2873 Erigeron canadensis
ECA247G2146 Erigeron canadensis
EL10Ac2g04534 Beta vulgaris
Eucgr.G03057 Eucalyptus grandis
FAN01G2425 Fragaria x ananassa
FAN06G2505 Fragaria x ananassa
FAN06G3728 Fragaria x ananassa
FAN10G0566 Fragaria x ananassa
FvH4_7g24440 Fragaria vesca
Glyma.11G229600 Glycine max
Glyma.18G027600 Glycine max
Gohir.A06G163800 Gossypium hirsutum
Gohir.D06G169500 Gossypium hirsutum
Gorai.010G198200 Gossypium raimondii
GSVIVG01032822001 Vitis vinifera
HanXRQChr01g0017101 Helianthus annuus
HanXRQChr08g0213181 Helianthus annuus
HanXRQChr09g0271791 Helianthus annuus
HanXRQChr12g0375531 Helianthus annuus
HanXRQChr15g0468911 Helianthus annuus
Haze_17223 Corylus avellana
Hma1.2p1_2256F.1_g318210 Hydrangea macrophylla
Hund13861 Selenicereus undatus
Lalb_Chr01g0004131 Lupinus albus
Lalb_Chr03g0027081 Lupinus albus
Lj1g0018800 Lotus japonicus
Lj3A878T24 Lonicera japonica
Lj6g0025019 Lotus japonicus
Lsat_1_v5_gn_8_41961 Lactuca sativa
Manes.04G157300 Manihot esculenta
Mapoly0034s0059 Marchantia polymorpha
Mapoly0053s0030 Marchantia polymorpha
MBI05_g05306_MAGBIO Magnolia biondii
MCO08G248 Micromonas commoda
MD01G1152600 Malus domestica
Medtr3g070470 Medicago truncatula
MELO3C029903.2 Cucumis melo
Migut.E00386 Erythranthe guttata
MSTRG.870 Avicennia marina
Nitab4.5_0000011g0270 Nicotiana tabacum
Nitab4.5_0000350g0020 Nicotiana tabacum
Nitab4.5_0003886g0110 Nicotiana tabacum
Nn2g11500 Nelumbo nucifera
Oeu057772.1 Olea europaea
Os08g0274700 Oryza sativa ssp. japonica
Peaxi162Scf00205g01136 Petunia axillaris
Peaxi162Scf00451g00930 Petunia axillaris
PGR142G0483 Punica granatum
PGSC0003DMG400030566 Solanum tuberosum
Phvul.001G242800 Phaseolus vulgaris
Potri.008G068100 Populus trichocarpa
Potri.010G189200 Populus trichocarpa
Pp3c25_12660 Physcomitrium patens
PRCOL_00002083 Prasinoderma coloniale
Prupe.2G202300 Prunus persica
Prupe.2G249700 Prunus persica
Psat5g128520 Pisum sativum
PSO339G2325 Papaver somniferum
QL08p063145 Quercus lobata
RcHm_v2.0_Chr1g0370121 Rosa chinensis
Sabra08G0050000 Salix brachista
Sabra10G0145900 Salix brachista
SalBow8G2997 Salvia bowleyana
SalBow8G4625 Salvia bowleyana
Sc11g0001040 Simmondsia chinensis
Sed0003089 Sechium edule
SGA_v2.0_scaffold170G38815 Striga asiatica
SMO356G0622 Selaginella moellendorffii
Solyc05g008620.4 Solanum lycopersicum
Sopen05g004460 Solanum pennellii
Sp4g22380 Schrenkiella parvula
TAR369G0168 Trochodendron aralioides
TAR633G2706 Trochodendron aralioides
THA.LOC104824313 Tarenaya hassleriana
Thecc.10G016900 Theobroma cacao
Thhalv10017287m.g Eutrema salsugineum
TPR.G16245 Trifolium pratense
TWI53G0619 Tripterygium wilfordii
TWI73G0774 Tripterygium wilfordii
unitig_52.g17125 Utricularia gibba
vmacro01419 Vaccinium macrocarpon
VMungo1383G0062 Vigna mungo
Zm00001eb198650 Zea mays
Zm00001eb412290 Zea mays

User provided reference genes

Program Settings