Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p36460 Brassica napus
Aa31LG6G5600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1819 Anthoceros agrestis
Actinidia07695 Actinidia chinensis
Actinidia39574 Actinidia chinensis
Ah.09g232560 Amaranthus hybridus
AL1G43960 Arabidopsis lyrata
Aqoxy1G01706 Aquilegia oxysepala
Aqoxy7G01552 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LME4NB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R3FQ90 Arachis hypogaea
AT1G30070 Arabidopsis thaliana
ATR0730G012 Amborella trichopoda
Atru.chr10.1223 Acer truncatum
AUR62002738 Chenopodium quinoa
AUR62026670 Chenopodium quinoa
AUR62030187 Chenopodium quinoa
AUR62040575 Chenopodium quinoa
BcaB07g32606 Brassica carinata
BcaC05g27023 Brassica carinata
BolC5t31605H Brassica oleracea
BraA09t39168Z Brassica rapa
C05p28860 Brassica napus
CAN.G50.16 Capsicum annuum
CANSAT35G0334 Cannabis sativa
CARHR029340 Cardamine hirsuta
Carub.0001s2829 Capsella rubella
Ca_18751_v3 Cicer arietinum L.
CBR_g22260 Chara braunii
Cc00_g08440 Coffea canephora
CDE02G0590 Ceratophyllum demersum
CDE06G1306 Ceratophyllum demersum
Cfa000939 Carpinus fangiana
Ciclev10016692m.g Citrus clementina
CiPaw.09G123100 Carya illinoinensis
CiPaw.10G091700 Carya illinoinensis
ClCG03G006840 Citrullus lanatus
COL.COLO4_31069 Corchorus olitorius
Cpa.g.c46789 Carica papaya
Cpa.g.sc246.8 Carica papaya
CsaV3_1G032420 Cucumis sativus L.
CSS0012983 Camellia sinensis var. sinensis
DCAR_003916 Daucus carota
Dinv32254 Davidia involucrata
Duzib192G0044 Durio zibethinus
Duzib235G0110 Durio zibethinus
ECA236G2996 Erigeron canadensis
Eucgr.D00295 Eucalyptus grandis
FAN11G3487 Fragaria x ananassa
FAN16G1298 Fragaria x ananassa
FAN21G3768 Fragaria x ananassa
FAN25G1374 Fragaria x ananassa
FvH4_3g05510 Fragaria vesca
Glyma.07G220200 Glycine max
Glyma.20G018500 Glycine max
Gohir.A05G148300 Gossypium hirsutum
Gohir.A10G041000 Gossypium hirsutum
Gohir.D05G150800 Gossypium hirsutum
Gohir.D10G041800 Gossypium hirsutum
Gorai.009G154900 Gossypium raimondii
Gorai.011G044400 Gossypium raimondii
GSVIVG01021471001 Vitis vinifera
HanXRQChr15g0480861 Helianthus annuus
Haze_05608 Corylus avellana
Hma1.2p1_0053F.1_g030930 Hydrangea macrophylla
HPP92_020290 Vanilla planifolia
Hund21546 Selenicereus undatus
Lalb_Chr05g0219641 Lupinus albus
Lalb_Chr09g0328651 Lupinus albus
Lj2A305G54 Lonicera japonica
Lj4g0005080 Lotus japonicus
Lsat_1_v5_gn_7_28281 Lactuca sativa
Manes.15G121800 Manihot esculenta
Manes.17G070300 Manihot esculenta
Mapoly0148s0015 Marchantia polymorpha
MBI10_g30420_MAGBIO Magnolia biondii
MBI16_g34289_MAGBIO Magnolia biondii
MBI18_g05573_MAGBIO Magnolia biondii
MD05G1283600 Malus domestica
MD10G1261800 Malus domestica
Medtr4g084250 Medicago truncatula
MELO3C002736.2 Cucumis melo
Migut.M00907 Erythranthe guttata
MSTRG.16244 Avicennia marina
MSTRG.7487 Avicennia marina
Nitab4.5_0000420g0030 Nicotiana tabacum
Nitab4.5_0006887g0020 Nicotiana tabacum
Nn3g20783 Nelumbo nucifera
Nn4g26571 Nelumbo nucifera
Oeu034148.1 Olea europaea
Oeu052366.1 Olea europaea
Os01g0757500 Oryza sativa ssp. japonica
Peaxi162Scf01211g00117 Petunia axillaris
PGR083G1302 Punica granatum
PGSC0003DMG400012093 Solanum tuberosum
Phvul.002G096900 Phaseolus vulgaris
Potri.011G085100 Populus trichocarpa
Pp3c4_13920 Physcomitrium patens
Prupe.4G081000 Prunus persica
Psat7g130040 Pisum sativum
PSO541G3455 Papaver somniferum
PSO675G5881 Papaver somniferum
QL05p057939 Quercus lobata
QL10p020720 Quercus lobata
QL10p031514 Quercus lobata
RcHm_v2.0_Chr5g0014231 Rosa chinensis
Rhsim02G0158200 Rhododendron simsii
Sabra11G0067000 Salix brachista
Sabra11G0068900 Salix brachista
SalBow8G3565 Salvia bowleyana
Sc17g0004900 Simmondsia chinensis
Sed0020286 Sechium edule
SEGI_02039 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00178 Striga asiatica
SGA_v2.0_scaffold333G48991 Striga asiatica
SHI24907 Sapria himalayana
SHI24908 Sapria himalayana
SMO353G0169 Selaginella moellendorffii
SMO364G0114 Selaginella moellendorffii
SMO364G0864 Selaginella moellendorffii
Solyc08g016670.3 Solanum lycopersicum
Sopen08g007080 Solanum pennellii
Sp1g25930 Schrenkiella parvula
TAR624G0623 Trochodendron aralioides
TAR626G0061 Trochodendron aralioides
THA.LOC104814300 Tarenaya hassleriana
THA.LOC104820649 Tarenaya hassleriana
Thecc.06G150300 Theobroma cacao
Thhalv10002717m.g Eutrema salsugineum
Thhalv10008455m.g Eutrema salsugineum
TPR.G38285 Trifolium pratense
TWI53G0952 Tripterygium wilfordii
unitig_32.g11444 Utricularia gibba
vmacro10962 Vaccinium macrocarpon
VMungo0251G3758 Vigna mungo
Zm00001eb152680 Zea mays
Zm00001eb370650 Zea mays

User provided reference genes

Program Settings