Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG11G6640 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1039 Anthoceros agrestis
AL6G15480 Arabidopsis lyrata
Aqoxy332s005 Aquilegia oxysepala
Aqoxy4G02536 Aquilegia oxysepala
Aqoxy5G03614 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.061K9L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R92L2M Arachis hypogaea
AT1G07780 Arabidopsis thaliana
AT1G29410 Arabidopsis thaliana
AT5G05590 Arabidopsis thaliana
ATR0730G169 Amborella trichopoda
Atru.chr12.48 Acer truncatum
Atru.chr7.2145 Acer truncatum
AUR62012260 Chenopodium quinoa
AUR62022893 Chenopodium quinoa
AUR62028615 Chenopodium quinoa
BcaB05g21694 Brassica carinata
BcaB05g21698 Brassica carinata
BolC2t06207H Brassica oleracea
BraA02t04856Z Brassica rapa
C02p02440 Brassica napus
CANSAT78G1638 Cannabis sativa
CARHR034480 Cardamine hirsuta
Carub.0006s0449 Capsella rubella
Ca_15132_v3 Cicer arietinum L.
CBR_g37169 Chara braunii
Cc02_g06410 Coffea canephora
Cfa001309 Carpinus fangiana
Ciclev10032361m.g Citrus clementina
CiPaw.01G059100 Carya illinoinensis
CiPaw.02G193000 Carya illinoinensis
ClCG07G004280 Citrullus lanatus
COL.COLO4_25743 Corchorus olitorius
Cre12.g519000 Chlamydomonas reinhardtii
CsaV3_5G010220 Cucumis sativus L.
CSS0002000 Camellia sinensis var. sinensis
CSS0019139 Camellia sinensis var. sinensis
CSS0029859 Camellia sinensis var. sinensis
DCAR_023439 Daucus carota
Dinv10614 Davidia involucrata
Dinv21738 Davidia involucrata
Dinv21739 Davidia involucrata
Duzib128G0549 Durio zibethinus
ECA233G4091 Erigeron canadensis
EL10Ac1g02124 Beta vulgaris
Eucgr.J00201 Eucalyptus grandis
FAN03G0254 Fragaria x ananassa
FAN07G0068 Fragaria x ananassa
FAN10G3671 Fragaria x ananassa
FAN12G0831 Fragaria x ananassa
FvH4_4g21980 Fragaria vesca
FvH4_7g24571 Fragaria vesca
Glyma.11G230900 Glycine max
Glyma.18G026400 Glycine max
Gohir.A04G093400 Gossypium hirsutum
Gohir.A10G237500 Gossypium hirsutum
Gohir.D04G132700 Gossypium hirsutum
Gohir.D10G249200 Gossypium hirsutum
Gorai.011G289500 Gossypium raimondii
Gorai.012G116600 Gossypium raimondii
GSVIVG01032805001 Vitis vinifera
HanXRQChr08g0222401 Helianthus annuus
HanXRQChr10g0286871 Helianthus annuus
Haze_17234 Corylus avellana
HPP92_011508 Vanilla planifolia
Hund13869 Selenicereus undatus
Lalb_Chr08g0231681 Lupinus albus
Lj1g0010131 Lotus japonicus
Lj6g0010776 Lotus japonicus
Lj8A66T51 Lonicera japonica
Lsat_1_v5_gn_8_11701 Lactuca sativa
Manes.10G011400 Manihot esculenta
Mapoly0041s0067 Marchantia polymorpha
MBI19_g36756_MAGBIO Magnolia biondii
MCO02G328 Micromonas commoda
MD07G1223000 Malus domestica
Medtr3g070890 Medicago truncatula
Medtr3g449480 Medicago truncatula
MELO3C026789.2 Cucumis melo
Migut.F00691 Erythranthe guttata
MSTRG.13829 Avicennia marina
MSTRG.8961 Avicennia marina
Nitab4.5_0003454g0010 Nicotiana tabacum
Nitab4.5_0005018g0020 Nicotiana tabacum
Nitab4.5_0010803g0020 Nicotiana tabacum
Nn2g13147 Nelumbo nucifera
Oeu004695.1 Olea europaea
Os02g0266000 Oryza sativa ssp. japonica
Peaxi162Scf00284g01041 Petunia axillaris
Peaxi162Scf00801g00729 Petunia axillaris
PGR044G0338 Punica granatum
PGSC0003DMG400010237 Solanum tuberosum
PGSC0003DMG401008474 Solanum tuberosum
Phvul.001G244100 Phaseolus vulgaris
Potri.008G069500 Populus trichocarpa
Potri.012G145600 Populus trichocarpa
Potri.014G188082 Populus trichocarpa
Potri.014G188400 Populus trichocarpa
Pp3c17_23550 Physcomitrium patens
PRCOL_00006470 Prasinoderma coloniale
Prupe.2G251100 Prunus persica
Psat5g129880 Pisum sativum
PSO017G0320 Papaver somniferum
PSO339G0515 Papaver somniferum
PSO384G3782 Papaver somniferum
PSO675G8834 Papaver somniferum
RcHm_v2.0_Chr1g0370411 Rosa chinensis
Sabra08G0051100 Salix brachista
SalBow6G5046 Salvia bowleyana
Sc10g0002410 Simmondsia chinensis
Sed0025730 Sechium edule
SEGI_33372 Sequoiadendron giganteum
SGA_v2.0_scaffold105G30487 Striga asiatica
SGA_v2.0_scaffold250G44984 Striga asiatica
SGA_v2.0_scaffold250G44986 Striga asiatica
SGA_v2.0_scaffold60G21012 Striga asiatica
SGA_v2.0_scaffold80G25745 Striga asiatica
SHI03421 Sapria himalayana
SMO364G0619 Selaginella moellendorffii
Solyc02g076760.3 Solanum lycopersicum
Solyc06g051410.4 Solanum lycopersicum
Sopen02g021670 Solanum pennellii
Sopen06g017380 Solanum pennellii
Sp6g37270 Schrenkiella parvula
TAR369G1110 Trochodendron aralioides
TAR623G1070 Trochodendron aralioides
THA.LOC104816542 Tarenaya hassleriana
Thecc.10G015200 Theobroma cacao
Thhalv10014368m.g Eutrema salsugineum
TPR.G11210 Trifolium pratense
TWI09G1208 Tripterygium wilfordii
unitig_0.g2023 Utricularia gibba
vmacro06962 Vaccinium macrocarpon
VMungo1383G1171 Vigna mungo
Zm00001eb203980 Zea mays
Zm00001eb281510 Zea mays

User provided reference genes

Program Settings