Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p24210 Brassica napus
A05p03730 Brassica napus
Aa31LG1G25060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4725 Anthoceros agrestis
Actinidia27060 Actinidia chinensis
Actinidia34618 Actinidia chinensis
AL3G36550 Arabidopsis lyrata
AL4G42040 Arabidopsis lyrata
AL4G42060 Arabidopsis lyrata
Aqoxy2G04109 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2A1XYJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VQKS2I Arachis hypogaea
AT2G43360 Arabidopsis thaliana
ATR0743G064 Amborella trichopoda
Atru.chr3.1563 Acer truncatum
Atru.chr3.1585 Acer truncatum
AUR62016250 Chenopodium quinoa
AUR62034151 Chenopodium quinoa
BcaB01g03390 Brassica carinata
BcaC01g05236 Brassica carinata
BcaC02g12407 Brassica carinata
BolC3t15243H Brassica oleracea
BolC4t22075H Brassica oleracea
BraA03t11630Z Brassica rapa
BraA05t19360Z Brassica rapa
C04p04420 Brassica napus
CAN.G65.188 Capsicum annuum
CANSAT78G0163 Cannabis sativa
CARHR138440 Cardamine hirsuta
Carub.0004s2582 Capsella rubella
Ca_26061_v3 Cicer arietinum L.
CBR_g31013 Chara braunii
CBR_g38872 Chara braunii
CBR_g54828 Chara braunii
CBR_g54834 Chara braunii
CBR_g54836 Chara braunii
CBR_g88688 Chara braunii
Cc03_g13240 Coffea canephora
CDE04G1318 Ceratophyllum demersum
CDE07G0588 Ceratophyllum demersum
Cfa015769 Carpinus fangiana
Ciclev10020553m.g Citrus clementina
Ciclev10024062m.g Citrus clementina
Ciclev10024495m.g Citrus clementina
CiPaw.02G056100 Carya illinoinensis
ClCG08G004320 Citrullus lanatus
COL.COLO4_14419 Corchorus olitorius
Cpa.g.c45785 Carica papaya
Cpa.g.sc71.16 Carica papaya
Cpa.g.sc71.17 Carica papaya
Cre06.g261150 Chlamydomonas reinhardtii
CsaV3_6G003770 Cucumis sativus L.
DCAR_029917 Daucus carota
Dinv22646 Davidia involucrata
Dinv44241 Davidia involucrata
Duzib093G1513 Durio zibethinus
ECA238G2991 Erigeron canadensis
EL10Ac3g05574 Beta vulgaris
Eucgr.A00054 Eucalyptus grandis
Eucgr.A00256 Eucalyptus grandis
Eucgr.A00259 Eucalyptus grandis
FAN07G1681 Fragaria x ananassa
FAN17G1451 Fragaria x ananassa
FvH4_4g11460 Fragaria vesca
Glyma.11G094200 Glycine max
Glyma.12G020600 Glycine max
Gohir.A01G231200 Gossypium hirsutum
Gohir.D01G221300 Gossypium hirsutum
Gorai.002G267900 Gossypium raimondii
GSVIVG01010734001 Vitis vinifera
HanXRQChr14g0434901 Helianthus annuus
Haze_00733 Corylus avellana
Haze_27367 Corylus avellana
HPP92_002776 Vanilla planifolia
HPP92_002777 Vanilla planifolia
HPP92_028241 Vanilla planifolia
Hund03143 Selenicereus undatus
Lalb_Chr01g0001081 Lupinus albus
Lalb_Chr03g0024511 Lupinus albus
Lj3g0021315 Lotus japonicus
Lj6A60G37 Lonicera japonica
Lsat_1_v5_gn_2_52041 Lactuca sativa
Manes.04G040500 Manihot esculenta
Mapoly0041s0099 Marchantia polymorpha
MBI11_g35028_MAGBIO Magnolia biondii
MCO13G117 Micromonas commoda
MD04G1037300 Malus domestica
Medtr4g076870 Medicago truncatula
MELO3C011628.2 Cucumis melo
Migut.N03069 Erythranthe guttata
MSTRG.22029 Avicennia marina
MSTRG.8561 Avicennia marina
Nitab4.5_0002368g0110 Nicotiana tabacum
Nitab4.5_0010690g0020 Nicotiana tabacum
Nn7g37651 Nelumbo nucifera
Oeu018049.1 Olea europaea
Os08g0540100 Oryza sativa ssp. japonica
Peaxi162Scf00375g00079 Petunia axillaris
PGR083G0205 Punica granatum
PGSC0003DMG400026904 Solanum tuberosum
Phvul.011G023300 Phaseolus vulgaris
Potri.007G126400 Populus trichocarpa
Potri.017G033300 Populus trichocarpa
Pp3c11_17440 Physcomitrium patens
Pp3c1_16250 Physcomitrium patens
Prupe.1G186700 Prunus persica
Psat3g051440 Pisum sativum
Psat7g172600 Pisum sativum
PSO017G2630 Papaver somniferum
PSO675G8272 Papaver somniferum
QL10p047743 Quercus lobata
RcHm_v2.0_Chr4g0408131 Rosa chinensis
Rhsim09G0030100 Rhododendron simsii
Sabra07G0102500 Salix brachista
Sabra17G0020900 Salix brachista
SalBow8G4084 Salvia bowleyana
Sc13g0007050 Simmondsia chinensis
Sed0015751 Sechium edule
SEGI_32939 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06187 Striga asiatica
SGA_v2.0_scaffold283G46961 Striga asiatica
SMO302G0043 Selaginella moellendorffii
SMO358G0150 Selaginella moellendorffii
Solyc06g073470.3 Solanum lycopersicum
Sopen06g029830 Solanum pennellii
Sp4g25460 Schrenkiella parvula
TAR362G0587 Trochodendron aralioides
THA.LOC104803617 Tarenaya hassleriana
Thecc.05G003200 Theobroma cacao
Thhalv10001495m.g Eutrema salsugineum
TPR.G13757 Trifolium pratense
TWI36G1239 Tripterygium wilfordii
unitig_736.g22473 Utricularia gibba
vmacro00603 Vaccinium macrocarpon
VMungo1127G1033 Vigna mungo
Zm00001eb037230 Zea mays
Zm00001eb198320 Zea mays

User provided reference genes

Program Settings