Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27830 Brassica napus
A09p55960 Brassica napus
Aa31LG3G6910 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1130 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2466 Anthoceros agrestis
Actinidia15836 Actinidia chinensis
Actinidia25589 Actinidia chinensis
AL8G24500 Arabidopsis lyrata
Aqoxy1G01617 Aquilegia oxysepala
Aqoxy22s001 Aquilegia oxysepala
Aqoxy5G04126 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.91S2FI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AY81KB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LN4RIT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W1BQBA Arachis hypogaea
AT5G50375 Arabidopsis thaliana
ATR0680G053 Amborella trichopoda
AUR62032039 Chenopodium quinoa
AUR62032713 Chenopodium quinoa
AUR62036512 Chenopodium quinoa
BcaB01g02892 Brassica carinata
BcaB05g24059 Brassica carinata
BcaB08g35134 Brassica carinata
BcaC01g04807 Brassica carinata
BcaC07g40897 Brassica carinata
BolC3t15677H Brassica oleracea
BolC8t51467H Brassica oleracea
BraA03t11994Z Brassica rapa
BraA09t40998Z Brassica rapa
C03p33570 Brassica napus
C08p38940 Brassica napus
CAN.G767.35 Capsicum annuum
CANSAT80G2472 Cannabis sativa
CARHR258110 Cardamine hirsuta
Carub.0008s1047 Capsella rubella
CBR_g48821 Chara braunii
CBR_g48823 Chara braunii
Cc00_g03610 Coffea canephora
Cc07_g17610 Coffea canephora
CDE02G3999 Ceratophyllum demersum
CDE09G1331 Ceratophyllum demersum
Ciclev10021465m.g Citrus clementina
CiPaw.11G009100 Carya illinoinensis
CiPaw.12G041000 Carya illinoinensis
ClCG03G003690 Citrullus lanatus
COL.COLO4_28085 Corchorus olitorius
Cpa.g.sc13.142 Carica papaya
Cre16.g657300 Chlamydomonas reinhardtii
CsaV3_1G009570 Cucumis sativus L.
CSS0000406 Camellia sinensis var. sinensis
DCAR_016405 Daucus carota
DCAR_021614 Daucus carota
Dinv04871 Davidia involucrata
Dinv11157 Davidia involucrata
Duzib205G1234 Durio zibethinus
ECA232G4063 Erigeron canadensis
EL10Ac5g11023 Beta vulgaris
Eucgr.K02737 Eucalyptus grandis
FAN08G1682 Fragaria x ananassa
FAN13G2894 Fragaria x ananassa
FAN18G4059 Fragaria x ananassa
FvH4_5g07950 Fragaria vesca
Glyma.04G194500 Glycine max
Glyma.06G171500 Glycine max
Gohir.A07G051800 Gossypium hirsutum
Gohir.D07G056300 Gossypium hirsutum
Gorai.001G059700 Gossypium raimondii
GSVIVG01008514001 Vitis vinifera
HanXRQChr09g0273061 Helianthus annuus
Haze_07235 Corylus avellana
HPP92_006201 Vanilla planifolia
HPP92_006202 Vanilla planifolia
Hund02427 Selenicereus undatus
Lalb_Chr11g0069651 Lupinus albus
Lj1g0013310 Lotus japonicus
Lj9C477T8 Lonicera japonica
Lsat_1_v5_gn_4_76740 Lactuca sativa
Manes.06G118100 Manihot esculenta
Manes.14G052800 Manihot esculenta
Mapoly0019s0004 Marchantia polymorpha
MCO03G530 Micromonas commoda
MD06G1143700 Malus domestica
MD14G1159000 Malus domestica
Medtr3g089010 Medicago truncatula
MELO3C002354.2 Cucumis melo
Migut.N02308 Erythranthe guttata
MSTRG.17588 Avicennia marina
Nitab4.5_0007541g0020 Nicotiana tabacum
Nitab4.5_0011040g0030 Nicotiana tabacum
Nn4g22373 Nelumbo nucifera
Os11g0302500 Oryza sativa ssp. japonica
Peaxi162Scf00378g00519 Petunia axillaris
PGR044G0561 Punica granatum
PGSC0003DMG400004674 Solanum tuberosum
Phvul.009G167500 Phaseolus vulgaris
Potri.015G093500 Populus trichocarpa
Pp3c14_22450 Physcomitrium patens
PRCOL_00007276 Prasinoderma coloniale
Prupe.5G152900 Prunus persica
Psat5g169720 Pisum sativum
PSO017G2706 Papaver somniferum
PSO017G3077 Papaver somniferum
PSO478G0845 Papaver somniferum
PSO675G0985 Papaver somniferum
QL10p004130 Quercus lobata
QL10p004191 Quercus lobata
RcHm_v2.0_Chr7g0190451 Rosa chinensis
Rhsim08G0188600 Rhododendron simsii
Sabra15G0115100 Salix brachista
SalBow7G2516 Salvia bowleyana
Sed0001462 Sechium edule
Sed0021273 Sechium edule
SEGI_05867 Sequoiadendron giganteum
SEGI_09495 Sequoiadendron giganteum
SGA_v2.0_scaffold115G32075 Striga asiatica
SGA_v2.0_scaffold3G01513 Striga asiatica
SGA_v2.0_scaffold42G16110 Striga asiatica
SHI39270 Sapria himalayana
SHI42710 Sapria himalayana
SMO180G0005 Selaginella moellendorffii
SMO353G0009 Selaginella moellendorffii
Solyc12g098640.3 Solanum lycopersicum
Sopen12g033400 Solanum pennellii
SpUn0050_0040 Schrenkiella parvula
SpUn0508_0010 Schrenkiella parvula
TAR371G0420 Trochodendron aralioides
THA.LOC104803145 Tarenaya hassleriana
Thecc.03G126700 Theobroma cacao
Thhalv10014300m.g Eutrema salsugineum
TPR.G26132 Trifolium pratense
TWI23G0755 Tripterygium wilfordii
TWI39G1237 Tripterygium wilfordii
unitig_27.g24986 Utricularia gibba
unitig_699.g19129 Utricularia gibba
vmacro19214 Vaccinium macrocarpon
VMungo1309G0937 Vigna mungo
Zm00001eb265520 Zea mays

User provided reference genes

Program Settings