Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p36920 Brassica napus
Aa31LG6G6160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.19 Anthoceros agrestis
Actinidia39548 Actinidia chinensis
AL1G43180 Arabidopsis lyrata
AL1G43190 Arabidopsis lyrata
Aqoxy181s006 Aquilegia oxysepala
Aqoxy4G00132 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5B81L0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5U1BBG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6FKD8P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8VV32I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.92TPPG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BILL0N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KM3L84 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LGS2NS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LMG3JT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QUL4C1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U8PUWG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WJF430 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZI6BD6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZY1C54 Arachis hypogaea
AT1G29390 Arabidopsis thaliana
AT1G29395 Arabidopsis thaliana
Atru.chr10.1382 Acer truncatum
AUR62027563 Chenopodium quinoa
AUR62035793 Chenopodium quinoa
BcaB07g32532 Brassica carinata
BcaC05g26964 Brassica carinata
BolC5t31543H Brassica oleracea
BraA09t39211Z Brassica rapa
C05p28160 Brassica napus
CAN.G257.44 Capsicum annuum
CANSAT35G0727 Cannabis sativa
CARHR028720 Cardamine hirsuta
Carub.0001s2759 Capsella rubella
Carub.0001s2760 Capsella rubella
Ca_17866_v3 Cicer arietinum L.
Cc09_g09540 Coffea canephora
CDE02G0736 Ceratophyllum demersum
CDE02G3176 Ceratophyllum demersum
Cfa001000 Carpinus fangiana
Ciclev10016585m.g Citrus clementina
CiPaw.09G127000 Carya illinoinensis
ClCG03G007160 Citrullus lanatus
COL.COLO4_22791 Corchorus olitorius
Cpa.g.sc17.123 Carica papaya
CsaV3_1G032740 Cucumis sativus L.
DCAR_031455 Daucus carota
Dinv30686 Davidia involucrata
Duzib160G0255 Durio zibethinus
Duzib235G0740 Durio zibethinus
ECA236G0867 Erigeron canadensis
EL10Ac8g19785 Beta vulgaris
Eucgr.E02358 Eucalyptus grandis
FAN11G0643 Fragaria x ananassa
FAN16G2612 Fragaria x ananassa
FAN21G3694 Fragaria x ananassa
FAN25G0508 Fragaria x ananassa
FvH4_3g06340 Fragaria vesca
Glyma.07G215100 Glycine max
Glyma.08G122300 Glycine max
Gohir.A09G078500 Gossypium hirsutum
Gohir.D09G079000 Gossypium hirsutum
Gorai.006G094000 Gossypium raimondii
GSVIVG01021385001 Vitis vinifera
HanXRQChr04g0118451 Helianthus annuus
Haze_05507 Corylus avellana
Haze_05513 Corylus avellana
Hma1.2p1_0015F.1_g010330 Hydrangea macrophylla
HPP92_023428 Vanilla planifolia
Lalb_Chr12g0204731 Lupinus albus
Lj1A1182G78 Lonicera japonica
Lj2C311T13 Lonicera japonica
Lj4g0008837 Lotus japonicus
Lsat_1_v5_gn_7_30901 Lactuca sativa
Manes.15G117500 Manihot esculenta
Mapoly0183s0020 Marchantia polymorpha
MBI07_g07809_MAGBIO Magnolia biondii
MBI10_g20188_MAGBIO Magnolia biondii
MD05G1291300 Malus domestica
MD10G1267000 Malus domestica
MD13G1187800 Malus domestica
Medtr8g088110 Medicago truncatula
MELO3C002708.2 Cucumis melo
Migut.M00955 Erythranthe guttata
MSTRG.7457 Avicennia marina
Nitab4.5_0008782g0020 Nicotiana tabacum
Nitab4.5_0010964g0070 Nicotiana tabacum
Nn3g20888 Nelumbo nucifera
Oeu021518.1 Olea europaea
Oeu046858.1 Olea europaea
Oeu046859.1 Olea europaea
Oeu046860.1 Olea europaea
Os05g0566800 Oryza sativa ssp. japonica
Peaxi162Scf00022g00018 Petunia axillaris
Peaxi162Scf00121g02310 Petunia axillaris
PGR042G0213 Punica granatum
PGSC0003DMG400003083 Solanum tuberosum
Phvul.002G245100 Phaseolus vulgaris
Potri.001G353500 Populus trichocarpa
Pp3c7_22090 Physcomitrium patens
Prupe.4G074300 Prunus persica
Psat7g065640 Pisum sativum
PSO017G1200 Papaver somniferum
PSO017G2460 Papaver somniferum
PSO170G6905 Papaver somniferum
PSO210G0511 Papaver somniferum
PSO724G0556 Papaver somniferum
PSO724G0719 Papaver somniferum
PSO729G0211 Papaver somniferum
QL05p060310 Quercus lobata
RcHm_v2.0_Chr5g0012971 Rosa chinensis
Sc05g0006570 Simmondsia chinensis
Sc17g0005210 Simmondsia chinensis
Sed0013902 Sechium edule
SEGI_26979 Sequoiadendron giganteum
SGA_v2.0_scaffold333G49020 Striga asiatica
SMO146G0255 Selaginella moellendorffii
Solyc02g071210.3 Solanum lycopersicum
Sopen02g020290 Solanum pennellii
Sp1g25330 Schrenkiella parvula
TAR624G0035 Trochodendron aralioides
THA.LOC104814269 Tarenaya hassleriana
THA.LOC104820615 Tarenaya hassleriana
Thecc.06G157200 Theobroma cacao
Thhalv10008700m.g Eutrema salsugineum
TPR.G6740 Trifolium pratense
TWI53G0745 Tripterygium wilfordii
unitig_748.g7816 Utricularia gibba
VMungo0251G3798 Vigna mungo
Zm00001eb109920 Zea mays
Zm00001eb296080 Zea mays
Zm00001eb345990 Zea mays
Zm00001eb381680 Zea mays
Zm00001eb381730 Zea mays
Zm00001eb383190 Zea mays

User provided reference genes

Program Settings