Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p44900 Brassica napus
Aa31LG4G1030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.855 Anthoceros agrestis
Actinidia05794 Actinidia chinensis
Ah.16g103320 Amaranthus hybridus
AL2G40620 Arabidopsis lyrata
Aqoxy3G02536 Aquilegia oxysepala
Aqoxy3G02538 Aquilegia oxysepala
Aqoxy3G02539 Aquilegia oxysepala
Aqoxy7G01889 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HH0QF2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HS3HJE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R04L27 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YDE99G Arachis hypogaea
AT1G80770 Arabidopsis thaliana
ATR0665G596 Amborella trichopoda
Atru.chr5.35 Acer truncatum
Atru.chr5.65 Acer truncatum
AUR62013794 Chenopodium quinoa
AUR62023361 Chenopodium quinoa
BcaC01g03983 Brassica carinata
BcaC01g05159 Brassica carinata
BcaC08g45338 Brassica carinata
BcaC08g47546 Brassica carinata
BolC6t38114H Brassica oleracea
BolC6t40388H Brassica oleracea
BraA07t30328Z Brassica rapa
BraA07t31997Z Brassica rapa
CAN.G221.2 Capsicum annuum
CANSAT25G0413 Cannabis sativa
CARHR073710 Cardamine hirsuta
Carub.0002s0078 Capsella rubella
Ca_20451_v3 Cicer arietinum L.
CBR_g3918 Chara braunii
CDE02G3958 Ceratophyllum demersum
CDE11G0052 Ceratophyllum demersum
Cfa022162 Carpinus fangiana
Ciclev10020203m.g Citrus clementina
CiPaw.14G015500 Carya illinoinensis
ClCG05G002820 Citrullus lanatus
COL.COLO4_11253 Corchorus olitorius
Cpa.g.c36423 Carica papaya
Cpa.g.c39652 Carica papaya
Cpa.g.c42586 Carica papaya
Cpa.g.sc143.1 Carica papaya
Cpa.g.sc24.96 Carica papaya
Cpa.g.sc24.97 Carica papaya
Cpa.g.sc4360.1 Carica papaya
Cpa.g.sc52.59 Carica papaya
Cre08.g384355 Chlamydomonas reinhardtii
CsaV3_3G010350 Cucumis sativus L.
CSS0025158 Camellia sinensis var. sinensis
CSS0026157 Camellia sinensis var. sinensis
CSS0041858 Camellia sinensis var. sinensis
DCAR_029525 Daucus carota
DCAR_029526 Daucus carota
Dinv43582 Davidia involucrata
Dinv44009 Davidia involucrata
Dinv44010 Davidia involucrata
Duzib268G1371 Durio zibethinus
ECA234G4049 Erigeron canadensis
EL10Ac1g00709 Beta vulgaris
Eucgr.E03531 Eucalyptus grandis
FAN03G0926 Fragaria x ananassa
FAN03G3361 Fragaria x ananassa
FAN06G0131 Fragaria x ananassa
FAN10G3233 Fragaria x ananassa
FAN10G3950 Fragaria x ananassa
FvH4_7g08680 Fragaria vesca
Glyma.08G340000 Glycine max
Gohir.A09G169400 Gossypium hirsutum
Gohir.D09G165100 Gossypium hirsutum
Gorai.006G186900 Gossypium raimondii
GSVIVG01022468001 Vitis vinifera
HanXRQChr02g0046691 Helianthus annuus
Haze_02915 Corylus avellana
Hma1.2p1_0973F.1_g243010 Hydrangea macrophylla
Hma1.2p1_1440F.1_g283520 Hydrangea macrophylla
HPP92_008983 Vanilla planifolia
HPP92_027052 Vanilla planifolia
Hund17127 Selenicereus undatus
Lalb_Chr03g0040871 Lupinus albus
Lj1g0022406 Lotus japonicus
Lj9A548T58 Lonicera japonica
Lsat_1_v5_gn_4_38680 Lactuca sativa
Manes.05G059500 Manihot esculenta
Mapoly0062s0042 Marchantia polymorpha
MCO05G391 Micromonas commoda
MD02G1225900 Malus domestica
MD07G1087900 Malus domestica
Medtr7g450930 Medicago truncatula
MELO3C006259.2 Cucumis melo
Migut.K00777 Erythranthe guttata
MSTRG.20658 Avicennia marina
Nitab4.5_0000204g0040 Nicotiana tabacum
Nitab4.5_0011341g0010 Nicotiana tabacum
Nn1g00634 Nelumbo nucifera
Nn6g33803 Nelumbo nucifera
Oeu021960.2 Olea europaea
Oeu044102.1 Olea europaea
Os08g0158900 Oryza sativa ssp. japonica
Peaxi162Scf00103g01924 Petunia axillaris
PGR142G0047 Punica granatum
PGSC0003DMG402017205 Solanum tuberosum
PGSC0003DMG403017205 Solanum tuberosum
Phvul.008G139400 Phaseolus vulgaris
Potri.002G134900 Populus trichocarpa
Pp3c1_10540 Physcomitrium patens
PRCOL_00000081 Prasinoderma coloniale
Prupe.2G114600 Prunus persica
Psat3g155960 Pisum sativum
PSO017G2814 Papaver somniferum
PSO063G0967 Papaver somniferum
QL04p025874 Quercus lobata
RcHm_v2.0_Chr1g0343911 Rosa chinensis
Rhsim07G0039900 Rhododendron simsii
Sc26g0001790 Simmondsia chinensis
Sed0001863 Sechium edule
SEGI_20073 Sequoiadendron giganteum
SGA_v2.0_scaffold45G17248 Striga asiatica
SMO174G0003 Selaginella moellendorffii
SMO174G0269 Selaginella moellendorffii
Solyc09g090460.3 Solanum lycopersicum
Sopen09g033380 Solanum pennellii
Sp5g34990 Schrenkiella parvula
TAR375G0879 Trochodendron aralioides
THA.LOC104804469 Tarenaya hassleriana
Thecc.02G366200 Theobroma cacao
Thhalv10018566m.g Eutrema salsugineum
TPR.G20612 Trifolium pratense
TPR.G39143 Trifolium pratense
TWI23G1015 Tripterygium wilfordii
unitig_26.g8865 Utricularia gibba
vmacro13537 Vaccinium macrocarpon
VMungo1080G0777 Vigna mungo
VMungo1080G1222 Vigna mungo
Zm00001eb415700 Zea mays

User provided reference genes

Program Settings