Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p39190 Brassica napus
Aa31LG4G3530 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2052 Anthoceros agrestis
Actinidia09048 Actinidia chinensis
Actinidia37370 Actinidia chinensis
Ah.14g085920 Amaranthus hybridus
AL2G33010 Arabidopsis lyrata
Aqoxy3G04204 Aquilegia oxysepala
Aqoxy3G04211 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.J0D3J2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P0FE7Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XD6SW7 Arachis hypogaea
AT1G73240 Arabidopsis thaliana
ATR0824G067 Amborella trichopoda
ATR0824G212 Amborella trichopoda
ATR0879G001 Amborella trichopoda
Atru.chr9.366 Acer truncatum
AUR62041591 Chenopodium quinoa
AUR62042457 Chenopodium quinoa
BcaB03g15036 Brassica carinata
BcaC01g04920 Brassica carinata
BcaC08g46742 Brassica carinata
BolC6t39777H Brassica oleracea
BraA07t31468Z Brassica rapa
C06p47380 Brassica napus
CAN.G1631.5 Capsicum annuum
CANSAT35G0050 Cannabis sativa
CARHR066250 Cardamine hirsuta
Carub.0002s2004 Capsella rubella
Ca_00517_v3 Cicer arietinum L.
CBR_g11193 Chara braunii
Cc04_g08790 Coffea canephora
CDE02G0130 Ceratophyllum demersum
CDE04G0503 Ceratophyllum demersum
Cfa000886 Carpinus fangiana
Ciclev10023713m.g Citrus clementina
CiPaw.09G118900 Carya illinoinensis
ClCG01G024960 Citrullus lanatus
Cpa.g.sc111.40 Carica papaya
Cre03.g197550 Chlamydomonas reinhardtii
CsaV3_6G052120 Cucumis sativus L.
CSS0018749 Camellia sinensis var. sinensis
DCAR_010217 Daucus carota
Dinv09771 Davidia involucrata
Duzib211G0450 Durio zibethinus
ECA233G5513 Erigeron canadensis
EL10Ac8g19487 Beta vulgaris
Eucgr.K02306 Eucalyptus grandis
FAN11G2201 Fragaria x ananassa
FAN16G3646 Fragaria x ananassa
FAN21G0753 Fragaria x ananassa
FAN25G1117 Fragaria x ananassa
FvH4_3g04970 Fragaria vesca
Glyma.13G220600 Glycine max
Glyma.15G091800 Glycine max
Gohir.A08G038700 Gossypium hirsutum
Gohir.D08G048900 Gossypium hirsutum
Gorai.004G048400 Gossypium raimondii
GSVIVG01012914001 Vitis vinifera
HanXRQChr05g0141141 Helianthus annuus
Haze_05701 Corylus avellana
Hma1.2p1_0403F.1_g145170 Hydrangea macrophylla
Hma1.2p1_0403F.1_g145180 Hydrangea macrophylla
Hma1.2p1_0403F.1_g145190 Hydrangea macrophylla
Hma1.2p1_2967F.1_g331010 Hydrangea macrophylla
Hund06728 Selenicereus undatus
Lalb_Chr20g0117701 Lupinus albus
Lj5A166G73 Lonicera japonica
Lj6g0007906 Lotus japonicus
Lj9C350G3 Lonicera japonica
Lsat_1_v5_gn_8_221 Lactuca sativa
Manes.03G090364 Manihot esculenta
Manes.15G103000 Manihot esculenta
Mapoly0061s0120 Marchantia polymorpha
MBI06_g21907_MAGBIO Magnolia biondii
MBI06_g39886_MAGBIO Magnolia biondii
MBI06_g43804_MAGBIO Magnolia biondii
MD05G1278400 Malus domestica
MD10G1257000 Malus domestica
Medtr0199s0020 Medicago truncatula
Medtr0199s0030 Medicago truncatula
Medtr2g018830 Medicago truncatula
Medtr8g007575 Medicago truncatula
Medtr8g007580 Medicago truncatula
Medtr8g008810 Medicago truncatula
Medtr8g008813 Medicago truncatula
MELO3C007099.2 Cucumis melo
Migut.O00253 Erythranthe guttata
MSTRG.11550 Avicennia marina
Nitab4.5_0001180g0240 Nicotiana tabacum
Nitab4.5_0004612g0090 Nicotiana tabacum
Nn4g24861 Nelumbo nucifera
Oeu023545.1 Olea europaea
Oeu038484.2 Olea europaea
Oeu061196.1 Olea europaea
Os02g0684300 Oryza sativa ssp. japonica
Peaxi162Scf00171g00427 Petunia axillaris
PGR044G1587 Punica granatum
PGSC0003DMG400025630 Solanum tuberosum
Phvul.006G167500 Phaseolus vulgaris
Potri.001G013300 Populus trichocarpa
Potri.003G213050 Populus trichocarpa
Pp3c23_16320 Physcomitrium patens
Prupe.4G086400 Prunus persica
Psat1g191760 Pisum sativum
PSO063G0483 Papaver somniferum
PSO782G3878 Papaver somniferum
QL05p054675 Quercus lobata
RcHm_v2.0_Chr5g0015011 Rosa chinensis
Rhsim08G0124400 Rhododendron simsii
Sabra01G0009700 Salix brachista
Sabra03G0155900 Salix brachista
Sabra03G0159100 Salix brachista
SalBow5G2126 Salvia bowleyana
Sc04g0004710 Simmondsia chinensis
Sed0002755 Sechium edule
Sed0004896 Sechium edule
SEGI_11499 Sequoiadendron giganteum
SGA_v2.0_scaffold90G27762 Striga asiatica
SMO358G0536 Selaginella moellendorffii
Solyc03g098340.4 Solanum lycopersicum
Sopen03g029090 Solanum pennellii
Sp5g28210 Schrenkiella parvula
TAR629G2351 Trochodendron aralioides
THA.LOC104810627 Tarenaya hassleriana
Thecc.03G071900 Theobroma cacao
Thhalv10018404m.g Eutrema salsugineum
TPR.G20455 Trifolium pratense
TPR.G26262 Trifolium pratense
TPR.G7652 Trifolium pratense
TWI81G0505 Tripterygium wilfordii
unitig_750.g28452 Utricularia gibba
vmacro17738 Vaccinium macrocarpon
vmacro17739 Vaccinium macrocarpon
VMungo0540G1265 Vigna mungo
Zm00001eb187400 Zea mays
Zm00001eb250810 Zea mays

User provided reference genes

Program Settings