Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p58000 Brassica napus
Aa31LG7G14820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1570 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1452 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2733 Anthoceros agrestis
Actinidia00525 Actinidia chinensis
Ah.01g006280 Amaranthus hybridus
AL4G10940 Arabidopsis lyrata
Aqoxy6G01115 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IZ1QNN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XL89DC Arachis hypogaea
AT2G21710 Arabidopsis thaliana
ATR0772G053 Amborella trichopoda
Atru.chr5.3019 Acer truncatum
AUR62011322 Chenopodium quinoa
AUR62016738 Chenopodium quinoa
BcaB08g35002 Brassica carinata
BcaC07g41120 Brassica carinata
BcaC07g41121 Brassica carinata
BolC8t51688H Brassica oleracea
BraA09t41190Z Brassica rapa
C08p41210 Brassica napus
CAN.G1412.8 Capsicum annuum
CANSAT01G2366 Cannabis sativa
CARHR112700 Cardamine hirsuta
CARHR112720 Cardamine hirsuta
Carub.0004s0075 Capsella rubella
Ca_20877_v3 Cicer arietinum L.
CBR_g45638 Chara braunii
CBR_g4822 Chara braunii
Cc02_g17560 Coffea canephora
CDE04G1094 Ceratophyllum demersum
CDE04G2564 Ceratophyllum demersum
CDE04G2942 Ceratophyllum demersum
Cfa004967 Carpinus fangiana
Cfa004994 Carpinus fangiana
Cfa004997 Carpinus fangiana
Cfa004998 Carpinus fangiana
Cfa005000 Carpinus fangiana
Ciclev10028120m.g Citrus clementina
CiPaw.05G064700 Carya illinoinensis
ClCG02G005000 Citrullus lanatus
COL.COLO4_25933 Corchorus olitorius
Cpa.g.sc62.154 Carica papaya
CsaV3_7G023590 Cucumis sativus L.
CSS0010527 Camellia sinensis var. sinensis
CSS0012215 Camellia sinensis var. sinensis
CSS0037419 Camellia sinensis var. sinensis
CSS0044100 Camellia sinensis var. sinensis
DCAR_001580 Daucus carota
Dinv07689 Davidia involucrata
Dinv23519 Davidia involucrata
Duzib052G1004 Durio zibethinus
ECA248G2826 Erigeron canadensis
EL10Ac9g21723 Beta vulgaris
Eucgr.I01271 Eucalyptus grandis
FAN15G0883 Fragaria x ananassa
FAN20G2643 Fragaria x ananassa
FAN24G2665 Fragaria x ananassa
FvH4_2g08810 Fragaria vesca
Glyma.11G117700 Glycine max
Glyma.11G117751 Glycine max
Glyma.12G043100 Glycine max
Gohir.A13G034200 Gossypium hirsutum
Gohir.D13G032600 Gossypium hirsutum
Gorai.013G037000 Gossypium raimondii
GSVIVG01031970001 Vitis vinifera
HanXRQChr11g0343841 Helianthus annuus
Haze_02388 Corylus avellana
Haze_02391 Corylus avellana
Haze_02436 Corylus avellana
Haze_02443 Corylus avellana
Haze_02444 Corylus avellana
Haze_02447 Corylus avellana
Hma1.2p1_0066F.1_g036390 Hydrangea macrophylla
Hma1.2p1_0066F.1_g036400 Hydrangea macrophylla
Hma1.2p1_0162F.1_g072270 Hydrangea macrophylla
HPP92_026666 Vanilla planifolia
HPP92_026667 Vanilla planifolia
Hund00267 Selenicereus undatus
Lalb_Chr03g0025671 Lupinus albus
Lj3g0011747 Lotus japonicus
Lj5C196G6 Lonicera japonica
Lsat_1_v5_gn_1_111380 Lactuca sativa
Manes.17G101300 Manihot esculenta
Mapoly0002s0171 Marchantia polymorpha
Mapoly0073s0074 Marchantia polymorpha
MBI02_g03744_MAGBIO Magnolia biondii
MBI02_g24399_MAGBIO Magnolia biondii
MD05G1066000 Malus domestica
Medtr4g070060 Medicago truncatula
MELO3C012521.2 Cucumis melo
Migut.B00234 Erythranthe guttata
MSTRG.20083 Avicennia marina
Nitab4.5_0000308g0140 Nicotiana tabacum
Nitab4.5_0004172g0020 Nicotiana tabacum
Nn5g29612 Nelumbo nucifera
Oeu015995.1 Olea europaea
Os07g0134700 Oryza sativa ssp. japonica
Peaxi162Scf00016g00735 Petunia axillaris
PGR142G2567 Punica granatum
PGSC0003DMG400000727 Solanum tuberosum
Phvul.011G045100 Phaseolus vulgaris
Potri.009G116200 Populus trichocarpa
Pp3c23_4470 Physcomitrium patens
Pp3c3_15310 Physcomitrium patens
Pp3c5_9520 Physcomitrium patens
Prupe.8G096600 Prunus persica
Psat7g141400 Pisum sativum
PSO541G1874 Papaver somniferum
PSO675G3023 Papaver somniferum
QL11p043893 Quercus lobata
RcHm_v2.0_Chr6g0264281 Rosa chinensis
Rhsim07G0028500 Rhododendron simsii
Rhsim11G0177400 Rhododendron simsii
Sabra09G0089200 Salix brachista
Sc18g0004450 Simmondsia chinensis
Sed0006971 Sechium edule
SEGI_23691 Sequoiadendron giganteum
SEGI_30781 Sequoiadendron giganteum
SEGI_40488 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20533 Striga asiatica
SMO358G0083 Selaginella moellendorffii
SMO367G0033 Selaginella moellendorffii
Solyc01g109630.4 Solanum lycopersicum
Sopen01g051820 Solanum pennellii
Sp4g00860 Schrenkiella parvula
TAR628G1411 Trochodendron aralioides
THA.LOC104824826 Tarenaya hassleriana
Thecc.02G085000 Theobroma cacao
Thhalv10000085m.g Eutrema salsugineum
TPR.G19396 Trifolium pratense
TWI31G1015 Tripterygium wilfordii
unitig_0.g65 Utricularia gibba
vmacro02103 Vaccinium macrocarpon
VMungo1127G2130 Vigna mungo
Zm00001eb299540 Zea mays

User provided reference genes

Program Settings