Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p41000 Brassica napus
Aa31LG5G17790 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.906 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1199 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1401 Anthoceros agrestis
Actinidia30055 Actinidia chinensis
Actinidia39432 Actinidia chinensis
Ah.15g093490 Amaranthus hybridus
AL3G18480 Arabidopsis lyrata
Aqoxy2G03983 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6511ZK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S4VI32 Arachis hypogaea
AT3G07210 Arabidopsis thaliana
ATR0561G172 Amborella trichopoda
Atru.chr6.1423 Acer truncatum
AUR62001131 Chenopodium quinoa
AUR62016550 Chenopodium quinoa
BcaC05g29746 Brassica carinata
BcaC05g29850 Brassica carinata
BolC5t34666H Brassica oleracea
BraA05t22827Z Brassica rapa
C05p60150 Brassica napus
CAN.G1432.2 Capsicum annuum
CAN.G874.4 Capsicum annuum
CANSAT01G1141 Cannabis sativa
CARHR081860 Cardamine hirsuta
Carub.0003s0673 Capsella rubella
Cc01_g16720 Coffea canephora
CDE05G1628 Ceratophyllum demersum
CDE05G2031 Ceratophyllum demersum
Ciclev10019544m.g Citrus clementina
CiPaw.01G050300 Carya illinoinensis
CiPaw.02G023400 Carya illinoinensis
ClCG09G008600 Citrullus lanatus
COL.COLO4_15621 Corchorus olitorius
Cpa.g.sc43.114 Carica papaya
CsaV3_7G026370 Cucumis sativus L.
CSS0000075 Camellia sinensis var. sinensis
DCAR_004736 Daucus carota
DCAR_004740 Daucus carota
DCAR_012669 Daucus carota
DCAR_026186 Daucus carota
Dinv12653 Davidia involucrata
Dinv19175 Davidia involucrata
Duzib133G0023 Durio zibethinus
Duzib138G1747 Durio zibethinus
ECA236G4946 Erigeron canadensis
ECA247G0587 Erigeron canadensis
ECA247G2712 Erigeron canadensis
EL10Ac7g17895 Beta vulgaris
Eucgr.K02139 Eucalyptus grandis
FAN15G1583 Fragaria x ananassa
FAN24G1841 Fragaria x ananassa
FAN27G1924 Fragaria x ananassa
FvH4_2g18560 Fragaria vesca
Glyma.08G349100 Glycine max
Glyma.18G167400 Glycine max
Gohir.A05G304001 Gossypium hirsutum
Gohir.A07G199300 Gossypium hirsutum
Gohir.D07G205700 Gossypium hirsutum
Gorai.001G231700 Gossypium raimondii
GSVIVG01003930001 Vitis vinifera
HanXRQChr04g0108051 Helianthus annuus
HanXRQChr10g0279511 Helianthus annuus
Haze_15255 Corylus avellana
Hma1.2p1_0226F.1_g095420 Hydrangea macrophylla
Hma1.2p1_1324F.1_g275630 Hydrangea macrophylla
HPP92_011784 Vanilla planifolia
Hund05575 Selenicereus undatus
Lalb_Chr13g0291101 Lupinus albus
Lj1A89T69 Lonicera japonica
Lj1g0022594 Lotus japonicus
Lsat_1_v5_gn_8_89380 Lactuca sativa
Lsat_1_v5_gn_9_15140 Lactuca sativa
Manes.12G047141 Manihot esculenta
Manes.13G049200 Manihot esculenta
Mapoly0029s0037 Marchantia polymorpha
MBI07_g18990_MAGBIO Magnolia biondii
MD05G1171800 Malus domestica
MD10G1160100 Malus domestica
Medtr7g056243 Medicago truncatula
MELO3C021083.2 Cucumis melo
Migut.D00766 Erythranthe guttata
MSTRG.18511 Avicennia marina
Nitab4.5_0000045g0530 Nicotiana tabacum
Nitab4.5_0003020g0080 Nicotiana tabacum
Nitab4.5_0003317g0030 Nicotiana tabacum
Nitab4.5_0009005g0020 Nicotiana tabacum
Nn1g07990 Nelumbo nucifera
Oeu057862.1 Olea europaea
Os01g0917200 Oryza sativa ssp. japonica
Os08g0528800 Oryza sativa ssp. japonica
Peaxi162Scf00068g02416 Petunia axillaris
Peaxi162Scf01312g00047 Petunia axillaris
PGR044G1204 Punica granatum
PGSC0003DMG400020164 Solanum tuberosum
PGSC0003DMG400027951 Solanum tuberosum
Phvul.008G130900 Phaseolus vulgaris
Potri.002G245700 Populus trichocarpa
Prupe.8G199200 Prunus persica
Psat3g148680 Pisum sativum
PSO017G3308 Papaver somniferum
PSO063G0087 Papaver somniferum
QL09p051278 Quercus lobata
QL09p051344 Quercus lobata
QL09p051399 Quercus lobata
RcHm_v2.0_Chr6g0284121 Rosa chinensis
Rhsim13G0047500 Rhododendron simsii
Sabra02G0187000 Salix brachista
Sc05g0001960 Simmondsia chinensis
Sed0019682 Sechium edule
SEGI_00167 Sequoiadendron giganteum
SEGI_24029 Sequoiadendron giganteum
SGA_v2.0_scaffold158G37516 Striga asiatica
SMO117G0236 Selaginella moellendorffii
Solyc06g083370.3 Solanum lycopersicum
Solyc09g059470.4 Solanum lycopersicum
Sopen06g034740 Solanum pennellii
Sopen09g022640 Solanum pennellii
Sp3g06160 Schrenkiella parvula
TAR362G0631 Trochodendron aralioides
TAR633G2144 Trochodendron aralioides
TAR633G2245 Trochodendron aralioides
THA.LOC104802659 Tarenaya hassleriana
THA.LOC104822492 Tarenaya hassleriana
Thecc.01G220400 Theobroma cacao
Thhalv10020454m.g Eutrema salsugineum
TPR.G6487 Trifolium pratense
TPR.G6488 Trifolium pratense
TWI18G0325 Tripterygium wilfordii
TWI36G0921 Tripterygium wilfordii
unitig_0.g223 Utricularia gibba
unitig_60.g25697 Utricularia gibba
vmacro02782 Vaccinium macrocarpon
VMungo1383G0872 Vigna mungo
Zm00001eb143450 Zea mays
Zm00001eb175070 Zea mays

User provided reference genes

Program Settings