Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p14030 Brassica napus
A02p25870 Brassica napus
A08p15970 Brassica napus
Aa31LG6G4830 Aethionema arabicum
Aa31LG9G10380 Aethionema arabicum
Actinidia02079 Actinidia chinensis
Actinidia13007 Actinidia chinensis
Actinidia14472 Actinidia chinensis
AL6G46940 Arabidopsis lyrata
AL7G30790 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.DI5N6C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GP740U Arachis hypogaea
AT4G22758 Arabidopsis thaliana
ATR0810G194 Amborella trichopoda
Atru.chr9.1453 Acer truncatum
AUR62010517 Chenopodium quinoa
AUR62017384 Chenopodium quinoa
BcaB03g11744 Brassica carinata
BcaB05g23765 Brassica carinata
BcaC01g00797 Brassica carinata
BcaC03g16309 Brassica carinata
BcaC09g51083 Brassica carinata
BcaNung01034 Brassica carinata
BolC1t01656H Brassica oleracea
BolC2t10138H Brassica oleracea
BolC3t20728H Brassica oleracea
BraA01t01350Z Brassica rapa
BraA02t07575Z Brassica rapa
BraA08t33569Z Brassica rapa
C01p17190 Brassica napus
C03p84390 Brassica napus
CAN.G630.58 Capsicum annuum
CANSAT21G1867 Cannabis sativa
CARHR229710 Cardamine hirsuta
CARHR254110 Cardamine hirsuta
Carub.0006s3122 Capsella rubella
Carub.0007s1851 Capsella rubella
Cc08_g13360 Coffea canephora
CDE04G1617 Ceratophyllum demersum
Cfa012027 Carpinus fangiana
Ciclev10021045m.g Citrus clementina
CiPaw.11G146600 Carya illinoinensis
CiPaw.12G104000 Carya illinoinensis
ClCG01G003580 Citrullus lanatus
COL.COLO4_23856 Corchorus olitorius
Cpa.g.sc29.79 Carica papaya
CsaV3_5G003680 Cucumis sativus L.
CSS0008936 Camellia sinensis var. sinensis
CSS0020464 Camellia sinensis var. sinensis
DCAR_000860 Daucus carota
Dinv37755 Davidia involucrata
Duzib068G0634 Durio zibethinus
Duzib084G0205 Durio zibethinus
EL10Ac5g12626 Beta vulgaris
Eucgr.D01978 Eucalyptus grandis
Eucgr.E00479 Eucalyptus grandis
FAN04G0086 Fragaria x ananassa
FAN08G0713 Fragaria x ananassa
FAN13G0541 Fragaria x ananassa
FAN18G1786 Fragaria x ananassa
FvH4_5g00820 Fragaria vesca
Glyma.01G212500 Glycine max
Glyma.11G029300 Glycine max
Gohir.A08G174400 Gossypium hirsutum
Gohir.A12G221600 Gossypium hirsutum
Gohir.D12G224100 Gossypium hirsutum
Gorai.004G203300 Gossypium raimondii
Gorai.008G240200 Gossypium raimondii
HanXRQChr07g0188621 Helianthus annuus
HanXRQChr17g0550471 Helianthus annuus
HanXRQChr17g0550481 Helianthus annuus
HanXRQChr17g0550491 Helianthus annuus
Haze_09041 Corylus avellana
Hma1.2p1_0138F.1_g063075 Hydrangea macrophylla
Hma1.2p1_0138F.1_g063080 Hydrangea macrophylla
HPP92_020968 Vanilla planifolia
Hund11559 Selenicereus undatus
Lalb_Chr05g0214641 Lupinus albus
Lj2A206G27 Lonicera japonica
Lj2g0005511 Lotus japonicus
Lsat_1_v5_gn_3_3441 Lactuca sativa
Lsat_1_v5_gn_6_9681 Lactuca sativa
Manes.02G032722 Manihot esculenta
MBI04_g35274_MAGBIO Magnolia biondii
MD04G1078000 Malus domestica
Medtr5g011770 Medicago truncatula
MELO3C005587.2 Cucumis melo
Migut.E00970 Erythranthe guttata
MSTRG.1934 Avicennia marina
Nitab4.5_0000439g0160 Nicotiana tabacum
Nitab4.5_0001265g0040 Nicotiana tabacum
Nitab4.5_0001816g0270 Nicotiana tabacum
Nitab4.5_0005241g0030 Nicotiana tabacum
Nn1g01234 Nelumbo nucifera
Nn1g05950 Nelumbo nucifera
Nn4g26397 Nelumbo nucifera
Oeu025553.1 Olea europaea
Oeu056795.1 Olea europaea
Os02g0448600 Oryza sativa ssp. japonica
Peaxi162Scf00102g01238 Petunia axillaris
Peaxi162Scf00271g00219 Petunia axillaris
PGR031G0052 Punica granatum
PGR042G3436 Punica granatum
PGSC0003DMG400003955 Solanum tuberosum
Phvul.002G151100 Phaseolus vulgaris
Potri.001G116200 Populus trichocarpa
Potri.003G116200 Populus trichocarpa
Prupe.5G080700 Prunus persica
Psat2g179800 Pisum sativum
PSO478G5168 Papaver somniferum
PSO782G4384 Papaver somniferum
QL12p015265 Quercus lobata
QL93p2011_0032 Quercus lobata
RcHm_v2.0_Chr7g0201261 Rosa chinensis
Rhsim11G0040300 Rhododendron simsii
Sabra03G0080700 Salix brachista
Sc22g0000560 Simmondsia chinensis
Sed0026323 Sechium edule
SEGI_10185 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14843 Striga asiatica
Solyc08g007500.3 Solanum lycopersicum
Solyc08g079590.3 Solanum lycopersicum
Sopen08g003460 Solanum pennellii
Sopen08g027940 Solanum pennellii
Sp6g05400 Schrenkiella parvula
Sp7g20810 Schrenkiella parvula
TAR629G2866 Trochodendron aralioides
THA.LOC104813933 Tarenaya hassleriana
Thecc.03G262800 Theobroma cacao
Thhalv10026059m.g Eutrema salsugineum
Thhalv10028909m.g Eutrema salsugineum
TWI60G0529 Tripterygium wilfordii
TWI81G0110 Tripterygium wilfordii
unitig_52.g17500 Utricularia gibba
vmacro00220 Vaccinium macrocarpon
VMungo1215G3172 Vigna mungo
Zm00001eb167430 Zea mays

User provided reference genes

Program Settings