Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p11010 Brassica napus
A09p61660 Brassica napus
Aa31LG2G8490 Aethionema arabicum
Ah.04g163140 Amaranthus hybridus
AL1G27050 Arabidopsis lyrata
Aqoxy1G03319 Aquilegia oxysepala
Aqoxy3G01068 Aquilegia oxysepala
Aqoxy5G02942 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1NAM0T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5FG4B2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5G098T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UU8CC3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XM49AS Arachis hypogaea
AT1G14990 Arabidopsis thaliana
ATR0796G095 Amborella trichopoda
Atru.chr11.497 Acer truncatum
AUR62014127 Chenopodium quinoa
AUR62032768 Chenopodium quinoa
AUR62042684 Chenopodium quinoa
BcaB02g06563 Brassica carinata
BcaC05g25431 Brassica carinata
BcaC07g38244 Brassica carinata
BolC5t30050H Brassica oleracea
BolC8t48670H Brassica oleracea
BolC8t52072H Brassica oleracea
BraA06t24281Z Brassica rapa
BraA09t41538Z Brassica rapa
C05p13060 Brassica napus
C08p09930 Brassica napus
C08p45240 Brassica napus
CAN.G1244.3 Capsicum annuum
CANSAT11G1373 Cannabis sativa
CARHR015530 Cardamine hirsuta
Carub.0001s1476 Capsella rubella
Ca_21512_v3 Cicer arietinum L.
CBR_g40805 Chara braunii
Cc11_g08600 Coffea canephora
CDE07G0704 Ceratophyllum demersum
Cfa008617 Carpinus fangiana
Ciclev10017195m.g Citrus clementina
CiPaw.06G011400 Carya illinoinensis
ClCG07G006660 Citrullus lanatus
COL.COLO4_20491 Corchorus olitorius
Cpa.g.sc65.146 Carica papaya
CsaV3_5G013870 Cucumis sativus L.
CSS0001207 Camellia sinensis var. sinensis
CSS0007655 Camellia sinensis var. sinensis
CSS0037826 Camellia sinensis var. sinensis
DCAR_023596 Daucus carota
DCAR_026778 Daucus carota
DCAR_032107 Daucus carota
Dinv07654 Davidia involucrata
Dinv14427 Davidia involucrata
Duzib251G0393 Durio zibethinus
ECA236G1659 Erigeron canadensis
EL10Ac9g21851 Beta vulgaris
Eucgr.B01298 Eucalyptus grandis
Eucgr.B02904 Eucalyptus grandis
Eucgr.E01608 Eucalyptus grandis
FAN05G3069 Fragaria x ananassa
FAN07G1516 Fragaria x ananassa
FAN12G4015 Fragaria x ananassa
FAN25G3147 Fragaria x ananassa
FvH4_4g19980 Fragaria vesca
Glyma.16G057902 Glycine max
Glyma.19G089600 Glycine max
Gohir.A03G120800 Gossypium hirsutum
Gohir.D02G144100 Gossypium hirsutum
Gorai.005G161400 Gossypium raimondii
GSVIVG01011752001 Vitis vinifera
HanXRQChr08g0212121 Helianthus annuus
HanXRQChr12g0364441 Helianthus annuus
Haze_10995 Corylus avellana
Hma1.2p1_0096F.1_g047800 Hydrangea macrophylla
HPP92_003868 Vanilla planifolia
HPP92_003899 Vanilla planifolia
Hund09673 Selenicereus undatus
Lalb_Chr08g0237401 Lupinus albus
Lj6g0000510 Lotus japonicus
Lsat_1_v5_gn_9_79661 Lactuca sativa
Manes.15G128100 Manihot esculenta
Mapoly0035s0140 Marchantia polymorpha
MBI16_g23757_MAGBIO Magnolia biondii
MBI16_g23758_MAGBIO Magnolia biondii
MD13G1024900 Malus domestica
MD16G1027400 Malus domestica
Medtr1g069405 Medicago truncatula
MELO3C018308.2 Cucumis melo
Migut.M00054 Erythranthe guttata
MSTRG.6631 Avicennia marina
Nitab4.5_0000426g0280 Nicotiana tabacum
Nitab4.5_0004230g0050 Nicotiana tabacum
Nn4g24251 Nelumbo nucifera
Oeu003383.1 Olea europaea
Oeu045860.1 Olea europaea
Os01g0606050 Oryza sativa ssp. japonica
Peaxi162Scf00253g01125 Petunia axillaris
PGR004G1422 Punica granatum
PGSC0003DMG400005984 Solanum tuberosum
Phvul.001G094900 Phaseolus vulgaris
Potri.008G129900 Populus trichocarpa
Potri.010G112300 Populus trichocarpa
Pp3c16_10100 Physcomitrium patens
Prupe.1G325600 Prunus persica
Psat6g049960 Pisum sativum
PSO170G3715 Papaver somniferum
PSO782G0484 Papaver somniferum
QL01p001565 Quercus lobata
QL08p008929 Quercus lobata
RcHm_v2.0_Chr4g0425701 Rosa chinensis
RcHm_v2.0_Chr4g0441361 Rosa chinensis
Rhsim09G0066400 Rhododendron simsii
Sabra08G0098500 Salix brachista
Sabra10G0082600 Salix brachista
Sc14g0007100 Simmondsia chinensis
Sed0011013 Sechium edule
Sed0017153 Sechium edule
SEGI_33740 Sequoiadendron giganteum
SGA_v2.0_scaffold135G34854 Striga asiatica
SGA_v2.0_scaffold154G37132 Striga asiatica
SGA_v2.0_scaffold181G39695 Striga asiatica
SGA_v2.0_scaffold2G00929 Striga asiatica
SGA_v2.0_scaffold6G03128 Striga asiatica
Solyc04g007700.3 Solanum lycopersicum
Sopen04g002790 Solanum pennellii
Sp1g13380 Schrenkiella parvula
TAR622G1178 Trochodendron aralioides
THA.LOC104823847 Tarenaya hassleriana
Thecc.02G282300 Theobroma cacao
Thhalv10009435m.g Eutrema salsugineum
TPR.G19139 Trifolium pratense
TWI79G1349 Tripterygium wilfordii
unitig_899.g15269 Utricularia gibba
vmacro00414 Vaccinium macrocarpon
vmacro14440 Vaccinium macrocarpon
VMungo0464G0261 Vigna mungo
Zm00001eb161570 Zea mays

User provided reference genes

Program Settings