Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p12800 Brassica napus
A08p31230 Brassica napus
Aa31LG7G1320 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.833 Anthoceros agrestis
Actinidia09803 Actinidia chinensis
Actinidia12571 Actinidia chinensis
Actinidia24363 Actinidia chinensis
Ah.06g185290 Amaranthus hybridus
AL1G29070 Arabidopsis lyrata
Aqoxy1G02067 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.06PSEJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z1JPC4 Arachis hypogaea
AT1G16900 Arabidopsis thaliana
ATR0602G238 Amborella trichopoda
Atru.chr2.2170 Acer truncatum
Atru.chr2.2174 Acer truncatum
AUR62019570 Chenopodium quinoa
AUR62043187 Chenopodium quinoa
BcaB02g06666 Brassica carinata
BcaB03g13027 Brassica carinata
BcaC05g25546 Brassica carinata
BcaC07g38821 Brassica carinata
BolC5t30227H Brassica oleracea
BolC8t49386H Brassica oleracea
BraA06t24441Z Brassica rapa
BraA08t35046Z Brassica rapa
C05p15120 Brassica napus
C08p17610 Brassica napus
CAN.G162.8 Capsicum annuum
CANSAT35G0471 Cannabis sativa
CARHR017370 Cardamine hirsuta
Carub.0001s1664 Capsella rubella
Ca_03990_v3 Cicer arietinum L.
CBR_g38668 Chara braunii
Cc05_g11200 Coffea canephora
CDE02G4663 Ceratophyllum demersum
Cfa019573 Carpinus fangiana
Cfa025275 Carpinus fangiana
Ciclev10019496m.g Citrus clementina
CiPaw.11G160900 Carya illinoinensis
ClCG11G017480 Citrullus lanatus
COL.COLO4_17568 Corchorus olitorius
COL.COLO4_17572 Corchorus olitorius
Cpa.g.sc97.103 Carica papaya
CsaV3_4G033140 Cucumis sativus L.
CSS0003229 Camellia sinensis var. sinensis
CSS0014594 Camellia sinensis var. sinensis
DCAR_013152 Daucus carota
Dinv14987 Davidia involucrata
Dinv18359 Davidia involucrata
Duzib187G0678 Durio zibethinus
Duzib213G0141 Durio zibethinus
Duzib213G0888 Durio zibethinus
EL10Ac4g08334 Beta vulgaris
Eucgr.F01228 Eucalyptus grandis
FAN11G3052 Fragaria x ananassa
FAN16G1691 Fragaria x ananassa
FAN21G1763 Fragaria x ananassa
FAN25G0069 Fragaria x ananassa
FvH4_3g18450 Fragaria vesca
Glyma.12G229300 Glycine max
Glyma.13G270500 Glycine max
Gohir.A03G066250 Gossypium hirsutum
Gohir.A04G098250 Gossypium hirsutum
Gohir.A07G160600 Gossypium hirsutum
Gohir.A13G149000 Gossypium hirsutum
Gohir.D13G153500 Gossypium hirsutum
Gorai.013G173400 Gossypium raimondii
GSVIVG01014208001 Vitis vinifera
HanXRQChr14g0442721 Helianthus annuus
Haze_09335 Corylus avellana
Hma1.2p1_1016F.1_g248140 Hydrangea macrophylla
Hma1.2p1_1016F.1_g248150 Hydrangea macrophylla
HPP92_004052 Vanilla planifolia
Hund10564 Selenicereus undatus
Lalb_Chr01g0006811 Lupinus albus
Lj3g0024865 Lotus japonicus
Lj8A149T49 Lonicera japonica
Lsat_1_v5_gn_9_100260 Lactuca sativa
Lsat_1_v5_gn_9_21740 Lactuca sativa
Manes.03G102000 Manihot esculenta
Mapoly0059s0091 Marchantia polymorpha
MBI01_g45400_MAGBIO Magnolia biondii
MBI01_g45631_MAGBIO Magnolia biondii
MBI07_g03181_MAGBIO Magnolia biondii
MCO07G083 Micromonas commoda
MD03G1241900 Malus domestica
MD11G1261800 Malus domestica
Medtr2g076680 Medicago truncatula
MELO3C025637.2 Cucumis melo
Migut.H01992 Erythranthe guttata
MSTRG.12867 Avicennia marina
Nitab4.5_0000246g0240 Nicotiana tabacum
Nitab4.5_0001145g0050 Nicotiana tabacum
Nn1g04407 Nelumbo nucifera
Nn1g09131 Nelumbo nucifera
Oeu059263.1 Olea europaea
Os01g0209000 Oryza sativa ssp. japonica
Peaxi162Scf00069g02235 Petunia axillaris
PGR083G2138 Punica granatum
PGSC0003DMG400012388 Solanum tuberosum
Phvul.005G066500 Phaseolus vulgaris
Potri.001G392050 Populus trichocarpa
Potri.011G110800 Populus trichocarpa
Pp3c6_16240 Physcomitrium patens
PRCOL_00005636 Prasinoderma coloniale
Prupe.4G166500 Prunus persica
Psat5g238320 Pisum sativum
PSO500G0209 Papaver somniferum
PSO675G3712 Papaver somniferum
QL08p026520 Quercus lobata
RcHm_v2.0_Chr5g0031201 Rosa chinensis
Rhsim06G0207300 Rhododendron simsii
Sabra11G0098300 Salix brachista
SalBow7G0883 Salvia bowleyana
Sc03g0010510 Simmondsia chinensis
Sed0009860 Sechium edule
SEGI_23731 Sequoiadendron giganteum
SEGI_37257 Sequoiadendron giganteum
SGA_v2.0_scaffold47G17797 Striga asiatica
SHI21382 Sapria himalayana
SMO143G0166 Selaginella moellendorffii
Solyc07g062540.3 Solanum lycopersicum
Sopen07g030770 Solanum pennellii
Sp1g15040 Schrenkiella parvula
TAR624G0947 Trochodendron aralioides
TAR626G0744 Trochodendron aralioides
THA.LOC104812323 Tarenaya hassleriana
Thecc.07G110000 Theobroma cacao
Thhalv10007218m.g Eutrema salsugineum
TPR.G19385 Trifolium pratense
TWI38G1600 Tripterygium wilfordii
TWI39G1070 Tripterygium wilfordii
unitig_749.g13539 Utricularia gibba
vmacro11932 Vaccinium macrocarpon
VMungo1080G1355 Vigna mungo
Zm00001eb120330 Zea mays

User provided reference genes

Program Settings