Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p04960 Brassica napus
Aa31LG1G6880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2374 Anthoceros agrestis
Actinidia19620 Actinidia chinensis
Ah.07g203840 Amaranthus hybridus
AL1G18120 Arabidopsis lyrata
Aqoxy4G03010 Aquilegia oxysepala
Aqoxy4G03011 Aquilegia oxysepala
Aqoxy5G01356 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7TC8PB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X1J0TB Arachis hypogaea
AT1G07840 Arabidopsis thaliana
ATR0767G044 Amborella trichopoda
Atru.chr13.987 Acer truncatum
AUR62014367 Chenopodium quinoa
AUR62019109 Chenopodium quinoa
BcaNung02660 Brassica carinata
BcaNung02661 Brassica carinata
BraA06t23702Z Brassica rapa
BraA06t23703Z Brassica rapa
C05p05910 Brassica napus
CAN.G193.4 Capsicum annuum
CAN.G375.34 Capsicum annuum
CANSAT35G1072 Cannabis sativa
CARHR007650 Cardamine hirsuta
Carub.0001s0718 Capsella rubella
Ca_11286_v3 Cicer arietinum L.
Ca_26381_v3 Cicer arietinum L.
Cc10_g08520 Coffea canephora
CDE02G1340 Ceratophyllum demersum
Ciclev10001834m.g Citrus clementina
CiPaw.01G111900 Carya illinoinensis
CiPaw.01G112000 Carya illinoinensis
CiPaw.07G163500 Carya illinoinensis
ClCG02G008140 Citrullus lanatus
ClCG11G014680 Citrullus lanatus
COL.COLO4_35271 Corchorus olitorius
Cpa.g.sc1556.4 Carica papaya
CsaV3_3G048080 Cucumis sativus L.
CSS0014517 Camellia sinensis var. sinensis
CSS0029582 Camellia sinensis var. sinensis
DCAR_028088 Daucus carota
Dinv42597 Davidia involucrata
Duzib093G1195 Durio zibethinus
ECA248G0412 Erigeron canadensis
EL10Ac1g00491 Beta vulgaris
Eucgr.F02158 Eucalyptus grandis
FAN04G0064 Fragaria x ananassa
FAN08G3514 Fragaria x ananassa
FAN18G0194 Fragaria x ananassa
FvH4_5g34380 Fragaria vesca
Glyma.04G096700 Glycine max
Glyma.06G098500 Glycine max
Gohir.A05G218700 Gossypium hirsutum
Gohir.D05G221400 Gossypium hirsutum
Gorai.009G228600 Gossypium raimondii
GSVIVG01009200001 Vitis vinifera
GSVIVG01026918001 Vitis vinifera
HanXRQChr09g0253981 Helianthus annuus
HanXRQChr13g0407601 Helianthus annuus
HanXRQChr15g0472131 Helianthus annuus
HanXRQChr17g0561001 Helianthus annuus
Haze_22483 Corylus avellana
HPP92_001777 Vanilla planifolia
HPP92_001778 Vanilla planifolia
Hund26823 Selenicereus undatus
Lalb_Chr23g0269971 Lupinus albus
Lj1g0021697 Lotus japonicus
Lj4A740T30 Lonicera japonica
Lj4g0023762 Lotus japonicus
Lj8A490G28 Lonicera japonica
Lj8A496G24 Lonicera japonica
Lsat_1_v5_gn_3_110060 Lactuca sativa
Manes.18G056600 Manihot esculenta
MBI16_g06011_MAGBIO Magnolia biondii
MCO16G233 Micromonas commoda
MD08G1202000 Malus domestica
MD08G1202600 Malus domestica
MD15G1388800 Malus domestica
Medtr3g099850 Medicago truncatula
MELO3C003509.2 Cucumis melo
Migut.N00274 Erythranthe guttata
MSTRG.24680 Avicennia marina
Nitab4.5_0000131g0040 Nicotiana tabacum
Nitab4.5_0005345g0030 Nicotiana tabacum
Nitab4.5_0005345g0060 Nicotiana tabacum
Nitab4.5_0009755g0010 Nicotiana tabacum
Nn1g05624 Nelumbo nucifera
Oeu034716.2 Olea europaea
Oeu040880.1 Olea europaea
Os01g0911000 Oryza sativa ssp. japonica
Peaxi162Scf01112g00131 Petunia axillaris
PGR042G0833 Punica granatum
PGSC0003DMG400008701 Solanum tuberosum
PGSC0003DMG400009352 Solanum tuberosum
Phvul.009G035100 Phaseolus vulgaris
Potri.005G152200 Populus trichocarpa
Pp3c26_12080 Physcomitrium patens
PRCOL_00003416 Prasinoderma coloniale
Prupe.1G535400 Prunus persica
Psat5g049560 Pisum sativum
PSO017G1526 Papaver somniferum
PSO170G0052 Papaver somniferum
PSO229G0121 Papaver somniferum
PSO381G0016 Papaver somniferum
PSO541G2296 Papaver somniferum
PSO640G0001 Papaver somniferum
PSO675G6381 Papaver somniferum
QL09p018366 Quercus lobata
QL12p040902 Quercus lobata
RcHm_v2.0_Chr7g0234971 Rosa chinensis
Rhsim05G0205900 Rhododendron simsii
Rhsim06G0070100 Rhododendron simsii
Sabra05G0119000 Salix brachista
SalBow3G3026 Salvia bowleyana
Sc15g0003090 Simmondsia chinensis
Sed0005434 Sechium edule
Sed0022235 Sechium edule
SEGI_07360 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06499 Striga asiatica
SMO140G0091 Selaginella moellendorffii
Solyc04g076560.3 Solanum lycopersicum
Sopen04g030280 Solanum pennellii
Sp1g06520 Schrenkiella parvula
TAR381G1609 Trochodendron aralioides
TAR625G0360 Trochodendron aralioides
THA.LOC104800630 Tarenaya hassleriana
Thecc.08G073300 Theobroma cacao
Thhalv10008245m.g Eutrema salsugineum
TPR.G6332 Trifolium pratense
TWI31G0793 Tripterygium wilfordii
unitig_26.g9553 Utricularia gibba
vmacro21357 Vaccinium macrocarpon
VMungo1309G0327 Vigna mungo
Zm00001eb076500 Zea mays
Zm00001eb306590 Zea mays
Zm00001eb365030 Zea mays
Zm00001eb388820 Zea mays

User provided reference genes

Program Settings