Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p07590 Brassica napus
Aa31sc586G30 Aethionema arabicum
Actinidia20382 Actinidia chinensis
Actinidia20383 Actinidia chinensis
Ah.09g231030 Amaranthus hybridus
Ah.14g082180 Amaranthus hybridus
AL2G22900 Arabidopsis lyrata
AL3G40252 Arabidopsis lyrata
Aqoxy7G01612 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.31F9U3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F0KYD5 Arachis hypogaea
AT3G24630 Arabidopsis thaliana
ATR0315G161 Amborella trichopoda
AUR62010967 Chenopodium quinoa
AUR62021477 Chenopodium quinoa
BcaB06g26676 Brassica carinata
BcaC06g35744 Brassica carinata
BolC7t41613H Brassica oleracea
BolC7t41614H Brassica oleracea
BraA07t28551Z Brassica rapa
C07p11350 Brassica napus
CANSAT56G2752 Cannabis sativa
CARHR100960 Cardamine hirsuta
Carub.0003s2504 Capsella rubella
Ca_25537_v3 Cicer arietinum L.
Cc06_g09850 Coffea canephora
CDE02G1606 Ceratophyllum demersum
Cfa003241 Carpinus fangiana
Cfa005599 Carpinus fangiana
Ciclev10007444m.g Citrus clementina
CiPaw.03G229900 Carya illinoinensis
CiPaw.04G162900 Carya illinoinensis
ClCG06G008720 Citrullus lanatus
ClCG11G002410 Citrullus lanatus
COL.COLO4_34842 Corchorus olitorius
Cpa.g.sc23.90 Carica papaya
CsaV3_1G024390 Cucumis sativus L.
CsaV3_2G002210 Cucumis sativus L.
CSS0003686 Camellia sinensis var. sinensis
CSS0008305 Camellia sinensis var. sinensis
CSS0038657 Camellia sinensis var. sinensis
DCAR_012067 Daucus carota
DCAR_028703 Daucus carota
Dinv05107 Davidia involucrata
Dinv11466 Davidia involucrata
Dinv36648 Davidia involucrata
Dinv41619 Davidia involucrata
Duzib150G1551 Durio zibethinus
Duzib187G0236 Durio zibethinus
ECA234G4430 Erigeron canadensis
EL10Ac8g18455 Beta vulgaris
Eucgr.C01030 Eucalyptus grandis
FAN19G1075 Fragaria x ananassa
FAN23G2457 Fragaria x ananassa
FAN26G1119 Fragaria x ananassa
FAN28G0021 Fragaria x ananassa
Glyma.05G230300 Glycine max
Glyma.07G084900 Glycine max
Glyma.08G037800 Glycine max
Glyma.09G192000 Glycine max
Gohir.A06G063700 Gossypium hirsutum
Gohir.A07G005700 Gossypium hirsutum
Gohir.D06G062400 Gossypium hirsutum
Gohir.D07G006300 Gossypium hirsutum
Gorai.001G005900 Gossypium raimondii
Gorai.010G072700 Gossypium raimondii
GSVIVG01015371001 Vitis vinifera
Haze_25764 Corylus avellana
HPP92_010043 Vanilla planifolia
HPP92_023915 Vanilla planifolia
HPP92_023926 Vanilla planifolia
HPP92_023927 Vanilla planifolia
HPP92_023948 Vanilla planifolia
Hund09124 Selenicereus undatus
Hund09560 Selenicereus undatus
Lalb_Chr14g0371581 Lupinus albus
Lalb_Chr16g0388151 Lupinus albus
Lalb_Chr22g0352731 Lupinus albus
Lj2g0010013 Lotus japonicus
Lj7E653T1 Lonicera japonica
Lsat_1_v5_gn_5_103481 Lactuca sativa
Manes.03G022200 Manihot esculenta
Manes.16G114300 Manihot esculenta
MBI04_g19171_MAGBIO Magnolia biondii
MD15G1182400 Malus domestica
Medtr6g087760 Medicago truncatula
MELO3C004562.2 Cucumis melo
MELO3C024628.2 Cucumis melo
MSTRG.19579 Avicennia marina
Nitab4.5_0000097g0120 Nicotiana tabacum
Nitab4.5_0002904g0040 Nicotiana tabacum
Nitab4.5_0009314g0010 Nicotiana tabacum
Nitab4.5_0013892g0010 Nicotiana tabacum
Nn2g11698 Nelumbo nucifera
Nn3g18070 Nelumbo nucifera
Oeu064588.2 Olea europaea
Peaxi162Scf00207g01317 Petunia axillaris
Peaxi162Scf00231g00216 Petunia axillaris
Peaxi162Scf01363g00023 Petunia axillaris
PGR142G3553 Punica granatum
PGSC0003DMG400000308 Solanum tuberosum
PGSC0003DMG400015636 Solanum tuberosum
Phvul.002G312500 Phaseolus vulgaris
Phvul.004G165100 Phaseolus vulgaris
Potri.018G082300 Populus trichocarpa
Prupe.7G233100 Prunus persica
Psat1g043640 Pisum sativum
PSO782G3244 Papaver somniferum
PSO832G1383 Papaver somniferum
QL02p043456 Quercus lobata
QL02p044157 Quercus lobata
RcHm_v2.0_Chr2g0090061 Rosa chinensis
Rhsim01G0098000 Rhododendron simsii
Rhsim01G0099500 Rhododendron simsii
Rhsim01G0099800 Rhododendron simsii
Rhsim01G0100000 Rhododendron simsii
Sabra18G0070100 Salix brachista
SalBow6G5362 Salvia bowleyana
Sc08g0007580 Simmondsia chinensis
Sed0013092 Sechium edule
Sed0018005 Sechium edule
Sed0026051 Sechium edule
Solyc07g032710.4 Solanum lycopersicum
Solyc12g007140.3 Solanum lycopersicum
Sopen07g016890 Solanum pennellii
Sopen12g003130 Solanum pennellii
Sp3g22410 Schrenkiella parvula
TAR383G0262 Trochodendron aralioides
THA.LOC104804597 Tarenaya hassleriana
Thecc.09G108000 Theobroma cacao
Thhalv10002425m.g Eutrema salsugineum
TPR.G10037 Trifolium pratense
TWI34G0072 Tripterygium wilfordii
TWI34G0806 Tripterygium wilfordii
TWI63G0748 Tripterygium wilfordii
vmacro20713 Vaccinium macrocarpon
VMungo0251G1265 Vigna mungo
VMungo0464G1894 Vigna mungo

User provided reference genes

Program Settings