Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p40750 Brassica napus
A05p30990 Brassica napus
Aa31LG8G5470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4026 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2362 Anthoceros agrestis
Actinidia11175 Actinidia chinensis
Actinidia24397 Actinidia chinensis
AL3G31930 Arabidopsis lyrata
Aqoxy3G04274 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7Y84RT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8S5M3J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HXF7IN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J0Y6Y5 Arachis hypogaea
AT3G18620 Arabidopsis thaliana
ATR0618G212 Amborella trichopoda
ATR0626G258 Amborella trichopoda
Atru.chr11.1235 Acer truncatum
AUR62015207 Chenopodium quinoa
AUR62017670 Chenopodium quinoa
BcaB04g18995 Brassica carinata
BcaB06g25914 Brassica carinata
BcaC01g03687 Brassica carinata
BcaC05g28591 Brassica carinata
BolC3t17260H Brassica oleracea
BolC5t33427H Brassica oleracea
BraA03t13232Z Brassica rapa
BraA05t21941Z Brassica rapa
C03p49620 Brassica napus
C05p46980 Brassica napus
CAN.G624.25 Capsicum annuum
CANSAT64G0248 Cannabis sativa
CARHR094000 Cardamine hirsuta
Carub.0003s1840 Capsella rubella
Ca_27076_v3 Cicer arietinum L.
CBR_g50402 Chara braunii
Cc11_g00190 Coffea canephora
CDE05G3190 Ceratophyllum demersum
Ciclev10032024m.g Citrus clementina
CiPaw.09G164500 Carya illinoinensis
ClCG10G011870 Citrullus lanatus
COL.COLO4_27672 Corchorus olitorius
CsaV3_3G031490 Cucumis sativus L.
CSS0004178 Camellia sinensis var. sinensis
DCAR_030400 Daucus carota
Dinv17600 Davidia involucrata
Duzib248G1275 Durio zibethinus
Duzib251G0713 Durio zibethinus
ECA233G4991 Erigeron canadensis
ECA246G5122 Erigeron canadensis
EL10Ac9g22925 Beta vulgaris
Eucgr.G02567 Eucalyptus grandis
FAN07G0754 Fragaria x ananassa
FAN12G1938 Fragaria x ananassa
FAN17G1536 Fragaria x ananassa
FvH4_4g36750 Fragaria vesca
Glyma.09G281400 Glycine max
Glyma.20G004400 Glycine max
Gohir.A05G307500 Gossypium hirsutum
Gohir.A13G026000 Gossypium hirsutum
Gohir.D05G307832 Gossypium hirsutum
Gohir.D13G024600 Gossypium hirsutum
Gorai.009G328100 Gossypium raimondii
Gorai.013G027800 Gossypium raimondii
GSVIVG01010179001 Vitis vinifera
HanXRQChr13g0388111 Helianthus annuus
HanXRQChr17g0540781 Helianthus annuus
Haze_19909 Corylus avellana
HPP92_024425 Vanilla planifolia
Hund00348 Selenicereus undatus
Hund08538 Selenicereus undatus
Lalb_Chr04g0258921 Lupinus albus
Lalb_Chr17g0338031 Lupinus albus
Lj2g0013630 Lotus japonicus
Lj3C851G4 Lonicera japonica
Lj6C721G15 Lonicera japonica
Lsat_1_v5_gn_3_33621 Lactuca sativa
Lsat_1_v5_gn_8_32400 Lactuca sativa
Manes.11G109700 Manihot esculenta
Mapoly0055s0077 Marchantia polymorpha
MBI03_g24016_MAGBIO Magnolia biondii
MD13G1007300 Malus domestica
MD13G1007400 Malus domestica
MD16G1000700 Malus domestica
Medtr1g036390 Medicago truncatula
Medtr4g074600 Medicago truncatula
MELO3C024032.2 Cucumis melo
Migut.A00690 Erythranthe guttata
MSTRG.11941 Avicennia marina
Nitab4.5_0000139g0120 Nicotiana tabacum
Nitab4.5_0002113g0130 Nicotiana tabacum
Nitab4.5_0002392g0080 Nicotiana tabacum
Nitab4.5_0007261g0090 Nicotiana tabacum
Nn4g24927 Nelumbo nucifera
Os04g0674450 Oryza sativa ssp. japonica
Os06g0308900 Oryza sativa ssp. japonica
Peaxi162Scf00363g00733 Petunia axillaris
Peaxi162Scf01172g00038 Petunia axillaris
PGR142G3609 Punica granatum
PGSC0003DMG400032559 Solanum tuberosum
Phvul.003G006600 Phaseolus vulgaris
Potri.007G070600 Populus trichocarpa
Pp3c13_19220 Physcomitrium patens
Pp3c16_1360 Physcomitrium patens
Prupe.1G345600 Prunus persica
Psat6g098600 Pisum sativum
Psat7g173520 Pisum sativum
PSO063G5510 Papaver somniferum
PSO782G2071 Papaver somniferum
QL03p043796 Quercus lobata
RcHm_v2.0_Chr4g0446471 Rosa chinensis
Rhsim06G0125900 Rhododendron simsii
Sabra07G0059300 Salix brachista
SalBow1G0039 Salvia bowleyana
SalBow8G1527 Salvia bowleyana
Sc10g0006750 Simmondsia chinensis
Sed0002544 Sechium edule
Sed0008330 Sechium edule
SEGI_31391 Sequoiadendron giganteum
SEGI_36505 Sequoiadendron giganteum
SGA_v2.0_scaffold173G39109 Striga asiatica
SMO146G0139 Selaginella moellendorffii
Solyc04g009380.3 Solanum lycopersicum
Sopen04g004500 Solanum pennellii
Sp3g16690 Schrenkiella parvula
TAR371G0486 Trochodendron aralioides
TAR629G1265 Trochodendron aralioides
THA.LOC104820416 Tarenaya hassleriana
Thecc.02G311800 Theobroma cacao
Thhalv10021331m.g Eutrema salsugineum
TPR.G32342 Trifolium pratense
TPR.G8237 Trifolium pratense
TWI53G2090 Tripterygium wilfordii
TWI74G1107 Tripterygium wilfordii
TWI74G1417 Tripterygium wilfordii
vmacro12413 Vaccinium macrocarpon
VMungo0251G1670 Vigna mungo
Zm00001eb066460 Zea mays
Zm00001eb433550 Zea mays

User provided reference genes

Program Settings