Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p36480 Brassica napus
A05p31890 Brassica napus
Aa31LG8G4780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.176 Anthoceros agrestis
Ah.06g192310 Amaranthus hybridus
AL1G55160 Arabidopsis lyrata
AL3G31080 Arabidopsis lyrata
Aqoxy5G00865 Aquilegia oxysepala
Aqoxy5G00867 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8TLB5V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E1YKD2 Arachis hypogaea
AT1G48510 Arabidopsis thaliana
AT3G17910 Arabidopsis thaliana
ATR1153G069 Amborella trichopoda
AUR62001019 Chenopodium quinoa
AUR62004935 Chenopodium quinoa
BcaB04g20806 Brassica carinata
BcaB04g20808 Brassica carinata
BcaB06g25853 Brassica carinata
BcaB08g34867 Brassica carinata
BcaC05g28739 Brassica carinata
BcaC09g48755 Brassica carinata
BolC1t04585H Brassica oleracea
BolC5t33576H Brassica oleracea
BraA01t03712Z Brassica rapa
BraA05t22021Z Brassica rapa
C01p46240 Brassica napus
C05p48400 Brassica napus
CAN.G843.48 Capsicum annuum
CANSAT80G1087 Cannabis sativa
CANSAT80G2587 Cannabis sativa
CARHR038140 Cardamine hirsuta
CARHR093240 Cardamine hirsuta
Carub.0001s3763 Capsella rubella
Carub.0001s3764 Capsella rubella
Carub.0003s1764 Capsella rubella
Ca_25346_v3 Cicer arietinum L.
CBR_g629 Chara braunii
Cc04_g06090 Coffea canephora
CDE07G0810 Ceratophyllum demersum
Cfa024306 Carpinus fangiana
Ciclev10015784m.g Citrus clementina
CiPaw.15G144600 Carya illinoinensis
ClCG04G010560 Citrullus lanatus
COL.COLO4_28892 Corchorus olitorius
Cpa.g.c34889 Carica papaya
Cpa.g.sc3.377 Carica papaya
Cre16.g664700 Chlamydomonas reinhardtii
CsaV3_1G007220 Cucumis sativus L.
CSS0043300 Camellia sinensis var. sinensis
DCAR_003540 Daucus carota
Dinv20235 Davidia involucrata
Duzib068G1453 Durio zibethinus
ECA236G2254 Erigeron canadensis
EL10Ac4g09125 Beta vulgaris
Eucgr.B00886 Eucalyptus grandis
Eucgr.B00986 Eucalyptus grandis
FAN04G2668 Fragaria x ananassa
FAN08G0665 Fragaria x ananassa
FAN13G1174 Fragaria x ananassa
FAN18G2151 Fragaria x ananassa
FvH4_5g17500 Fragaria vesca
Glyma.07G103200 Glycine max
Glyma.09G174400 Glycine max
Gohir.A09G175000 Gossypium hirsutum
Gohir.D09G170071 Gossypium hirsutum
Gohir.D09G170128 Gossypium hirsutum
Gorai.006G191400 Gossypium raimondii
GSVIVG01008457001 Vitis vinifera
HanXRQChr06g0178071 Helianthus annuus
Haze_18886 Corylus avellana
Hma1.2p1_0163F.1_g072970 Hydrangea macrophylla
Hma1.2p1_0163F.1_g072980 Hydrangea macrophylla
HPP92_019169 Vanilla planifolia
Hund22311 Selenicereus undatus
Lalb_Chr14g0370621 Lupinus albus
Lalb_Chr22g0353511 Lupinus albus
Lj2g0015776 Lotus japonicus
Lj5C159G17 Lonicera japonica
Lsat_1_v5_gn_8_83620 Lactuca sativa
Manes.06G004600 Manihot esculenta
Mapoly0094s0071 Marchantia polymorpha
MCO16G342 Micromonas commoda
MD06G1228400 Malus domestica
MD14G1237600 Malus domestica
Medtr6g069850 Medicago truncatula
MELO3C002139.2 Cucumis melo
Migut.I00267 Erythranthe guttata
MSTRG.6190 Avicennia marina
Nitab4.5_0001264g0050 Nicotiana tabacum
Nitab4.5_0010397g0010 Nicotiana tabacum
Nn5g30598 Nelumbo nucifera
Oeu026263.1 Olea europaea
Os03g0200700 Oryza sativa ssp. japonica
Peaxi162Scf00314g00335 Petunia axillaris
PGR044G1909 Punica granatum
PGSC0003DMG400005757 Solanum tuberosum
Phvul.004G149700 Phaseolus vulgaris
Potri.012G045200 Populus trichocarpa
Pp3c5_4480 Physcomitrium patens
PRCOL_00002102 Prasinoderma coloniale
Prupe.5G234900 Prunus persica
Psat1g030240 Pisum sativum
PSO017G0826 Papaver somniferum
PSO170G1171 Papaver somniferum
QL10p030702 Quercus lobata
QL12p007232 Quercus lobata
RcHm_v2.0_Chr7g0178161 Rosa chinensis
Rhsim08G0150200 Rhododendron simsii
Sabra12G0031400 Salix brachista
SalBow7G1179 Salvia bowleyana
Sc12g0007980 Simmondsia chinensis
Sed0009200 Sechium edule
SEGI_19570 Sequoiadendron giganteum
SEGI_34948 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20371 Striga asiatica
SMO147G0391 Selaginella moellendorffii
Solyc03g118610.4 Solanum lycopersicum
Sopen03g037560 Solanum pennellii
Sp1g35470 Schrenkiella parvula
Sp3g16030 Schrenkiella parvula
TAR628G0421 Trochodendron aralioides
TAR628G1286 Trochodendron aralioides
TAR628G1367 Trochodendron aralioides
THA.LOC104821828 Tarenaya hassleriana
Thecc.03G059000 Theobroma cacao
Thhalv10011732m.g Eutrema salsugineum
Thhalv10011895m.g Eutrema salsugineum
Thhalv10021015m.g Eutrema salsugineum
TPR.G8624 Trifolium pratense
TWI60G0738 Tripterygium wilfordii
unitig_27.g25108 Utricularia gibba
vmacro08951 Vaccinium macrocarpon
VMungo0464G0388 Vigna mungo
VMungo0464G1491 Vigna mungo
Zm00001eb007820 Zea mays
Zm00001eb099110 Zea mays
Zm00001eb338430 Zea mays

User provided reference genes

Program Settings