Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p21030 Brassica napus
Aa31LG11G11190 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3353 Anthoceros agrestis
Actinidia01057 Actinidia chinensis
Actinidia28713 Actinidia chinensis
Actinidia32217 Actinidia chinensis
Ah.07g203770 Amaranthus hybridus
AL6G29800 Arabidopsis lyrata
Aqoxy5G02775 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6ZCT8S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZZ97E1 Arachis hypogaea
AT5G18525 Arabidopsis thaliana
ATR0796G139 Amborella trichopoda
Atru.chr11.54 Acer truncatum
AUR62002565 Chenopodium quinoa
AUR62029987 Chenopodium quinoa
BcaB08g36665 Brassica carinata
BcaB08g36667 Brassica carinata
BcaB08g36668 Brassica carinata
BcaB08g36669 Brassica carinata
BcaC04g18671 Brassica carinata
BolC9t58663H Brassica oleracea
BraA10t44167Z Brassica rapa
C09p57960 Brassica napus
CAN.G484.83 Capsicum annuum
CANSAT01G1159 Cannabis sativa
CARHR194490 Cardamine hirsuta
Carub.0006s1680 Capsella rubella
Ca_10843_v3 Cicer arietinum L.
Ca_10844_v3 Cicer arietinum L.
Ca_10845_v3 Cicer arietinum L.
Ca_10846_v3 Cicer arietinum L.
Ca_29759_v3 Cicer arietinum L.
CBR_g49230 Chara braunii
CBR_g49232 Chara braunii
CBR_g52179 Chara braunii
Cc03_g00260 Coffea canephora
CDE02G0728 Ceratophyllum demersum
CDE02G3337 Ceratophyllum demersum
Cfa015717 Carpinus fangiana
Ciclev10004134m.g Citrus clementina
CiPaw.02G071000 Carya illinoinensis
ClCG06G004260 Citrullus lanatus
COL.COLO4_34544 Corchorus olitorius
COL.COLO4_34545 Corchorus olitorius
Cpa.g.sc146.39 Carica papaya
Cre17.g732650 Chlamydomonas reinhardtii
CsaV3_6G000150 Cucumis sativus L.
CSS0001073 Camellia sinensis var. sinensis
CSS0025323 Camellia sinensis var. sinensis
DCAR_023392 Daucus carota
DCAR_023394 Daucus carota
DCAR_023431 Daucus carota
DCAR_023432 Daucus carota
Dinv29525 Davidia involucrata
Duzib151G0781 Durio zibethinus
Duzib151G1162 Durio zibethinus
ECA246G0223 Erigeron canadensis
EL10Ac3g06266 Beta vulgaris
Eucgr.B02209 Eucalyptus grandis
FAN07G0038 Fragaria x ananassa
FAN12G2136 Fragaria x ananassa
FvH4_4g21250 Fragaria vesca
Glyma.10G243400 Glycine max
Glyma.20G150800 Glycine max
Gohir.A09G067200 Gossypium hirsutum
Gohir.D09G066800 Gossypium hirsutum
Gorai.006G081300 Gossypium raimondii
GSVIVG01017603001 Vitis vinifera
GSVIVG01017662001 Vitis vinifera
HanXRQChr05g0148391 Helianthus annuus
Haze_00795 Corylus avellana
HPP92_010030 Vanilla planifolia
HPP92_015254 Vanilla planifolia
Hund12246 Selenicereus undatus
Lalb_Chr06g0160761 Lupinus albus
Lj3C839G18 Lonicera japonica
Lj5g0009067 Lotus japonicus
Lsat_1_v5_gn_7_27920 Lactuca sativa
Manes.15G004000 Manihot esculenta
Mapoly0075s0059 Marchantia polymorpha
MBI18_g09609_MAGBIO Magnolia biondii
MD13G1143700 Malus domestica
Medtr1g102710 Medicago truncatula
MELO3C021237.2 Cucumis melo
Migut.K00927 Erythranthe guttata
Migut.K01509 Erythranthe guttata
Migut.N00012 Erythranthe guttata
MSTRG.19398 Avicennia marina
Nitab4.5_0000895g0160 Nicotiana tabacum
Nitab4.5_0004665g0020 Nicotiana tabacum
Nn4g25411 Nelumbo nucifera
Oeu022697.1 Olea europaea
Os01g0327600 Oryza sativa ssp. japonica
Peaxi162Scf01194g00137 Petunia axillaris
PGR031G2985 Punica granatum
Phvul.007G062300 Phaseolus vulgaris
Potri.010G153300 Populus trichocarpa
PRCOL_00005869 Prasinoderma coloniale
Prupe.1G108200 Prunus persica
Psat6g203520 Pisum sativum
PSO170G3214 Papaver somniferum
QL06p013845 Quercus lobata
QL93p1872_0012 Quercus lobata
RcHm_v2.0_Chr4g0426861 Rosa chinensis
RcHm_v2.0_Chr4g0426871 Rosa chinensis
RcHm_v2.0_Chr6g0275911 Rosa chinensis
Rhsim03G0109500 Rhododendron simsii
Rhsim04G0247200 Rhododendron simsii
Sabra10G0117900 Salix brachista
SalBow5G3991 Salvia bowleyana
Sc25g0001750 Simmondsia chinensis
Sed0007110 Sechium edule
SEGI_01668 Sequoiadendron giganteum
SEGI_12439 Sequoiadendron giganteum
SEGI_19987 Sequoiadendron giganteum
SEGI_30621 Sequoiadendron giganteum
SEGI_34586 Sequoiadendron giganteum
SEGI_37408 Sequoiadendron giganteum
SGA_v2.0_scaffold227G43203 Striga asiatica
SMO203G0100 Selaginella moellendorffii
SMO203G0276 Selaginella moellendorffii
Solyc12g099010.3 Solanum lycopersicum
Solyc12g099020.2 Solanum lycopersicum
Sopen12g033750 Solanum pennellii
Sp6g25800 Schrenkiella parvula
TAR362G0682 Trochodendron aralioides
TAR362G0979 Trochodendron aralioides
TAR362G1290 Trochodendron aralioides
THA.LOC104818852 Tarenaya hassleriana
Thecc.04G310500 Theobroma cacao
Thhalv10012423m.g Eutrema salsugineum
TPR.G26104 Trifolium pratense
TWI53G0357 Tripterygium wilfordii
unitig_26.g10616 Utricularia gibba
vmacro08001 Vaccinium macrocarpon
VMungo0720G3059 Vigna mungo
Zm00001eb131030 Zea mays

User provided reference genes

Program Settings