Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p04530 Brassica napus
A09p48340 Brassica napus
Aa31LG10G10450 Aethionema arabicum
Actinidia02948 Actinidia chinensis
Ah.16g102300 Amaranthus hybridus
AL5G36570 Arabidopsis lyrata
Aqoxy4G02929 Aquilegia oxysepala
AT3G55420 Arabidopsis thaliana
ATR0559G355 Amborella trichopoda
Atru.chr12.452 Acer truncatum
Atru.chr12.474 Acer truncatum
AUR62012083 Chenopodium quinoa
BcaB01g00102 Brassica carinata
BcaB02g08423 Brassica carinata
BcaC02g09755 Brassica carinata
BcaC07g39844 Brassica carinata
BcaC07g39859 Brassica carinata
BolC4t25261H Brassica oleracea
BolC8t50680H Brassica oleracea
BraA04t16163Z Brassica rapa
BraA09t40286Z Brassica rapa
C04p36960 Brassica napus
C08p30460 Brassica napus
C08p30630 Brassica napus
CANSAT56G2481 Cannabis sativa
CANSAT56G4483 Cannabis sativa
CARHR165440 Cardamine hirsuta
Carub.0005s2214 Capsella rubella
Ca_26455_v3 Cicer arietinum L.
Cc02_g07860 Coffea canephora
Cc05_g01760 Coffea canephora
CDE02G1824 Ceratophyllum demersum
CDE08G0377 Ceratophyllum demersum
Cfa001474 Carpinus fangiana
Ciclev10032947m.g Citrus clementina
CiPaw.01G287400 Carya illinoinensis
CiPaw.02G183900 Carya illinoinensis
ClCG07G003270 Citrullus lanatus
ClCG09G019730 Citrullus lanatus
COL.COLO4_15040 Corchorus olitorius
Cpa.g.sc1.404 Carica papaya
CsaV3_5G008020 Cucumis sativus L.
CsaV3_5G026670 Cucumis sativus L.
CSS0041204 Camellia sinensis var. sinensis
DCAR_011695 Daucus carota
DCAR_027619 Daucus carota
Dinv03047 Davidia involucrata
Dinv26015 Davidia involucrata
Duzib106G1822 Durio zibethinus
Duzib128G0371 Durio zibethinus
ECA238G1104 Erigeron canadensis
Eucgr.G02934 Eucalyptus grandis
FAN01G0694 Fragaria x ananassa
FAN01G2215 Fragaria x ananassa
FAN03G1496 Fragaria x ananassa
FAN06G0736 Fragaria x ananassa
FAN06G1328 Fragaria x ananassa
FAN10G2347 Fragaria x ananassa
FvH4_7g22470 Fragaria vesca
Glyma.02G091600 Glycine max
Glyma.18G291400 Glycine max
Gohir.A10G218800 Gossypium hirsutum
Gohir.A13G019300 Gossypium hirsutum
Gohir.D10G228400 Gossypium hirsutum
Gohir.D13G019900 Gossypium hirsutum
Gorai.011G260800 Gossypium raimondii
Gorai.013G022300 Gossypium raimondii
GSVIVG01016552001 Vitis vinifera
HanXRQChr02g0037481 Helianthus annuus
HanXRQChr14g0457951 Helianthus annuus
HPP92_019446 Vanilla planifolia
Lalb_Chr10g0091641 Lupinus albus
Lalb_Chr17g0336141 Lupinus albus
Lj1g0024567 Lotus japonicus
Lj1P937T48 Lonicera japonica
Lj8C84T10 Lonicera japonica
Lsat_1_v5_gn_2_119121 Lactuca sativa
Lsat_1_v5_gn_8_15580 Lactuca sativa
Manes.07G116200 Manihot esculenta
Manes.10G030300 Manihot esculenta
Mapoly0062s0070 Marchantia polymorpha
MBI05_g22035_MAGBIO Magnolia biondii
MD01G1134100 Malus domestica
MD07G1198300 Malus domestica
Medtr7g026320 Medicago truncatula
MELO3C021630.2 Cucumis melo
MELO3C023848.2 Cucumis melo
Migut.F01495 Erythranthe guttata
MSTRG.8252 Avicennia marina
Nitab4.5_0001097g0030 Nicotiana tabacum
Nitab4.5_0013062g0010 Nicotiana tabacum
Nn2g11101 Nelumbo nucifera
Nn2g13341 Nelumbo nucifera
Oeu048246.1 Olea europaea
Oeu064380.1 Olea europaea
Os05g0459300 Oryza sativa ssp. japonica
Os12g0571300 Oryza sativa ssp. japonica
Peaxi162Scf00886g00003 Petunia axillaris
PGR142G3643 Punica granatum
PGSC0003DMG400023532 Solanum tuberosum
Phvul.008G010700 Phaseolus vulgaris
Potri.008G055800 Populus trichocarpa
Potri.010G203900 Populus trichocarpa
Prupe.2G235300 Prunus persica
Psat3g161760 Pisum sativum
PSO151G0057 Papaver somniferum
PSO339G4490 Papaver somniferum
PSO339G6083 Papaver somniferum
PSO384G2205 Papaver somniferum
QL08p059794 Quercus lobata
RcHm_v2.0_Chr1g0367081 Rosa chinensis
Rhsim03G0130700 Rhododendron simsii
Sabra08G0040500 Salix brachista
Sabra10G0157500 Salix brachista
SalBow6G2402 Salvia bowleyana
Sc10g0001550 Simmondsia chinensis
Sed0002022 Sechium edule
Sed0012553 Sechium edule
Sed0020308 Sechium edule
SEGI_33908 Sequoiadendron giganteum
SGA_v2.0_scaffold221G42666 Striga asiatica
SGA_v2.0_scaffold2G01004 Striga asiatica
Solyc05g054450.1 Solanum lycopersicum
Sopen05g032940 Solanum pennellii
Sp5g07050 Schrenkiella parvula
TAR623G0785 Trochodendron aralioides
TAR633G1881 Trochodendron aralioides
THA.LOC104807715 Tarenaya hassleriana
THA.LOC104810028 Tarenaya hassleriana
THA.LOC104824274 Tarenaya hassleriana
Thecc.10G042400 Theobroma cacao
Thhalv10010708m.g Eutrema salsugineum
TPR.G23775 Trifolium pratense
TWI38G1118 Tripterygium wilfordii
TWI63G0967 Tripterygium wilfordii
unitig_8.g3317 Utricularia gibba
vmacro07170 Vaccinium macrocarpon
VMungo1383G1027 Vigna mungo

User provided reference genes

Program Settings