Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p18080 Brassica napus
A07p38760 Brassica napus
Aa31LG4G2910 Aethionema arabicum
Aa31LG4G2950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1866 Anthoceros agrestis
Actinidia25327 Actinidia chinensis
Actinidia26024 Actinidia chinensis
Actinidia26822 Actinidia chinensis
Actinidia26823 Actinidia chinensis
Actinidia27733 Actinidia chinensis
Actinidia27734 Actinidia chinensis
Ah.08g216850 Amaranthus hybridus
AL2G32250 Arabidopsis lyrata
Aqoxy7G04073 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E27NE4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W8MD5J Arachis hypogaea
AT1G72560 Arabidopsis thaliana
ATR0598G079 Amborella trichopoda
Atru.chr1.3999 Acer truncatum
AUR62001476 Chenopodium quinoa
AUR62009889 Chenopodium quinoa
BcaB05g24764 Brassica carinata
BolC2t09060H Brassica oleracea
BolC6t39733H Brassica oleracea
BraA02t06855Z Brassica rapa
BraA07t31429Z Brassica rapa
C02p30110 Brassica napus
C06p46920 Brassica napus
CAN.G668.41 Capsicum annuum
CANSAT56G3183 Cannabis sativa
CARHR065500 Cardamine hirsuta
Carub.0002s1942 Capsella rubella
Ca_09568_v3 Cicer arietinum L.
CBR_g44922 Chara braunii
Cc04_g01260 Coffea canephora
CDE05G1788 Ceratophyllum demersum
CDE11G0151 Ceratophyllum demersum
Ciclev10024809m.g Citrus clementina
CiPaw.01G218000 Carya illinoinensis
CiPaw.02G135100 Carya illinoinensis
ClCG09G001010 Citrullus lanatus
COL.COLO4_30746 Corchorus olitorius
Cpa.g.sc1732.1 Carica papaya
Cpa.g.sc589.4 Carica papaya
Cre12.g496200 Chlamydomonas reinhardtii
CsaV3_7G034420 Cucumis sativus L.
CSS0000574 Camellia sinensis var. sinensis
DCAR_026415 Daucus carota
Dinv20426 Davidia involucrata
Dinv20428 Davidia involucrata
Dinv37863 Davidia involucrata
Duzib160G0875 Durio zibethinus
Duzib235G0347 Durio zibethinus
ECA232G2029 Erigeron canadensis
EL10Ac7g16417 Beta vulgaris
Eucgr.F04406 Eucalyptus grandis
FAN02G3375 Fragaria x ananassa
FAN05G3283 Fragaria x ananassa
FAN09G4405 Fragaria x ananassa
FAN14G0396 Fragaria x ananassa
FvH4_6g34890 Fragaria vesca
Glyma.03G264400 Glycine max
Glyma.19G263400 Glycine max
Gohir.A10G053800 Gossypium hirsutum
Gohir.D10G055800 Gossypium hirsutum
Gorai.011G059500 Gossypium raimondii
GSVIVG01016742001 Vitis vinifera
HanXRQChr09g0276901 Helianthus annuus
Haze_16039 Corylus avellana
HPP92_026305 Vanilla planifolia
HPP92_026306 Vanilla planifolia
Hund18687 Selenicereus undatus
Lalb_Chr04g0261101 Lupinus albus
Lalb_Chr15g0076791 Lupinus albus
Lj1g0011724 Lotus japonicus
Lj5C36G17 Lonicera japonica
Lj9A532T67 Lonicera japonica
Lsat_1_v5_gn_4_93500 Lactuca sativa
Manes.11G019400 Manihot esculenta
Mapoly0019s0146 Marchantia polymorpha
MBI13_g12059_MAGBIO Magnolia biondii
MCO02G354 Micromonas commoda
MD09G1181500 Malus domestica
MD17G1167700 Malus domestica
Medtr7g117565 Medicago truncatula
MELO3C024350.2 Cucumis melo
Migut.I01082 Erythranthe guttata
MSTRG.10949 Avicennia marina
MSTRG.4792 Avicennia marina
Nitab4.5_0002898g0010 Nicotiana tabacum
Nitab4.5_0004422g0040 Nicotiana tabacum
Nn6g35707 Nelumbo nucifera
Nn8g38631 Nelumbo nucifera
Oeu000412.2 Olea europaea
Oeu015486.1 Olea europaea
Oeu015487.1 Olea europaea
Oeu047032.1 Olea europaea
Os07g0613300 Oryza sativa ssp. japonica
Peaxi162Scf00038g02138 Petunia axillaris
PGR102G0536 Punica granatum
PGSC0003DMG400022883 Solanum tuberosum
Phvul.009G263000 Phaseolus vulgaris
Potri.001G168100 Populus trichocarpa
Potri.003G066200 Populus trichocarpa
Pp3c12_21910 Physcomitrium patens
PRCOL_00005439 Prasinoderma coloniale
Prupe.3G039600 Prunus persica
Psat3g000040 Pisum sativum
PSO063G0826 Papaver somniferum
PSO421G0066 Papaver somniferum
QL05p004145 Quercus lobata
RcHm_v2.0_Chr2g0145781 Rosa chinensis
Rhsim12G0210100 Rhododendron simsii
Sabra01G0142500 Salix brachista
Sabra03G0038700 Salix brachista
SalBow6G0288 Salvia bowleyana
SalBow6G5091 Salvia bowleyana
Sc15g0000400 Simmondsia chinensis
Sed0003060 Sechium edule
SEGI_13199 Sequoiadendron giganteum
SGA_v2.0_scaffold71G23839 Striga asiatica
SMO141G0108 Selaginella moellendorffii
Solyc03g122370.4 Solanum lycopersicum
Sopen03g041140 Solanum pennellii
Sp5g27640 Schrenkiella parvula
TAR626G1694 Trochodendron aralioides
THA.LOC104808055 Tarenaya hassleriana
THA.LOC104812251 Tarenaya hassleriana
Thecc.06G121300 Theobroma cacao
Thhalv10018070m.g Eutrema salsugineum
TPR.G28874 Trifolium pratense
TWI31G0259 Tripterygium wilfordii
unitig_899.g14764 Utricularia gibba
unitig_899.g14765 Utricularia gibba
vmacro22036 Vaccinium macrocarpon
VMungo1309G3067 Vigna mungo
Zm00001eb109040 Zea mays
Zm00001eb327340 Zea mays

User provided reference genes

Program Settings