Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05480 Brassica napus
A03p09420 Brassica napus
A10p20370 Brassica napus
Aa31LG9G12460 Aethionema arabicum
Actinidia15492 Actinidia chinensis
Actinidia17042 Actinidia chinensis
Ah.11g041150 Amaranthus hybridus
AL8G19260 Arabidopsis lyrata
Aqoxy6G01708 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea
AT5G42330 Arabidopsis thaliana
Atru.chr13.137 Acer truncatum
AUR62036861 Chenopodium quinoa
AUR62040795 Chenopodium quinoa
BcaB01g04868 Brassica carinata
BcaB01g05139 Brassica carinata
BcaB08g36584 Brassica carinata
BcaC03g13663 Brassica carinata
BcaC04g18579 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p02630 Brassica napus
BolC3t13569H Brassica oleracea
BolC9t58559H Brassica oleracea
BraA02t05499Z Brassica rapa
BraA03t10260Z Brassica rapa
BraA10t44107Z Brassica rapa
C03p11000 Brassica napus
C09p56960 Brassica napus
CAN.G311.116 Capsicum annuum
CANSAT25G0564 Cannabis sativa
CARHR284960 Cardamine hirsuta
Carub.0008s0685 Capsella rubella
Ca_15432_v3 Cicer arietinum L.
Ca_15457_v3 Cicer arietinum L.
Cc10_g00650 Coffea canephora
CDE04G0695 Ceratophyllum demersum
CDE05G1909 Ceratophyllum demersum
Cfa012650 Carpinus fangiana
Cfa014080 Carpinus fangiana
Ciclev10002509m.g Citrus clementina
CiPaw.07G138600 Carya illinoinensis
CiPaw.08G073400 Carya illinoinensis
ClCG08G009410 Citrullus lanatus
COL.COLO4_05218 Corchorus olitorius
Cpa.g.c36471 Carica papaya
CsaV3_6G031520 Cucumis sativus L.
CSS0029462 Camellia sinensis var. sinensis
CSS0030992 Camellia sinensis var. sinensis
CSS0038566 Camellia sinensis var. sinensis
CSS0039739 Camellia sinensis var. sinensis
DCAR_009532 Daucus carota
Dinv05532 Davidia involucrata
Dinv31944 Davidia involucrata
Duzib093G0863 Durio zibethinus
Duzib116G0932 Durio zibethinus
Duzib128G0429 Durio zibethinus
ECA238G3324 Erigeron canadensis
EL10Ac1g01953 Beta vulgaris
FAN15G1374 Fragaria x ananassa
FAN20G2818 Fragaria x ananassa
FAN27G2782 Fragaria x ananassa
FvH4_2g37430 Fragaria vesca
Glyma.04G017800 Glycine max
Glyma.06G018100 Glycine max
Gohir.A02G084300 Gossypium hirsutum
Gohir.A05G179400 Gossypium hirsutum
Gohir.D02G100200 Gossypium hirsutum
Gohir.D05G182600 Gossypium hirsutum
Gorai.005G113600 Gossypium raimondii
Gorai.009G187900 Gossypium raimondii
GSVIVG01008671001 Vitis vinifera
HanXRQChr06g0183961 Helianthus annuus
HanXRQChr14g0428071 Helianthus annuus
Haze_22782 Corylus avellana
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla
HPP92_021048 Vanilla planifolia
Hund01764 Selenicereus undatus
Lalb_Chr23g0265781 Lupinus albus
Lj1g0015612 Lotus japonicus
Lj4A11T70 Lonicera japonica
Lsat_1_v5_gn_2_4041 Lactuca sativa
Manes.05G133900 Manihot esculenta
Manes.18G005301 Manihot esculenta
MBI05_g43168_MAGBIO Magnolia biondii
Medtr3g115300 Medicago truncatula
MELO3C026535.2 Cucumis melo
Migut.C00385 Erythranthe guttata
MSTRG.24929 Avicennia marina
MSTRG.977 Avicennia marina
Nitab4.5_0000588g0080 Nicotiana tabacum
Nn6g31737 Nelumbo nucifera
Oeu000692.1 Olea europaea
Oeu035840.1 Olea europaea
Oeu064631.1 Olea europaea
Peaxi162Scf00893g00005 Petunia axillaris
PGR083G0609 Punica granatum
PGSC0003DMG400009903 Solanum tuberosum
Phvul.009G010900 Phaseolus vulgaris
Potri.002G010400 Populus trichocarpa
Potri.005G250800 Populus trichocarpa
Prupe.1G354300 Prunus persica
Psat0s2670g0120 Pisum sativum
PSO541G4697 Papaver somniferum
PSO675G2006 Papaver somniferum
QL02p014184 Quercus lobata
RcHm_v2.0_Chr6g0304291 Rosa chinensis
Rhsim06G0007100 Rhododendron simsii
Sabra02G0007800 Salix brachista
Sabra04G0144200 Salix brachista
Sabra05G0194000 Salix brachista
Sabra11G0114300 Salix brachista
Sabra11G0115000 Salix brachista
Sabra11G0115600 Salix brachista
SalBow5G5667 Salvia bowleyana
SalBow7G0698 Salvia bowleyana
Sc02g0009100 Simmondsia chinensis
Sc15g0004410 Simmondsia chinensis
Sed0002015 Sechium edule
SGA_v2.0_scaffold133G34635 Striga asiatica
SHI42933 Sapria himalayana
Solyc04g082380.4 Solanum lycopersicum
Sopen04g035980 Solanum pennellii
Sp6g25100 Schrenkiella parvula
TAR628G0603 Trochodendron aralioides
THA.LOC104813174 Tarenaya hassleriana
THA.LOC104825425 Tarenaya hassleriana
Thecc.04G308600 Theobroma cacao
Thecc.06G128900 Theobroma cacao
Thecc.07G149400 Theobroma cacao
Thecc.08G059400 Theobroma cacao
Thhalv10014687m.g Eutrema salsugineum
TPR.G38112 Trifolium pratense
TWI12G0392 Tripterygium wilfordii
TWI56G1114 Tripterygium wilfordii
unitig_0.g2084 Utricularia gibba
unitig_747.g21542 Utricularia gibba
vmacro21809 Vaccinium macrocarpon
VMungo1309G0957 Vigna mungo

User provided reference genes

Program Settings