Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p06720 Brassica napus
Aa31LG7G6130 Aethionema arabicum
Actinidia07853 Actinidia chinensis
Ah.12g059860 Amaranthus hybridus
AL3G42010 Arabidopsis lyrata
Aqoxy2G01347 Aquilegia oxysepala
Aqoxy7G00316 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5875FQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.689Y8G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9VNC38 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JXA9IA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NQ2DUC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QI3CHY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TQSI6C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea
AT2G04340 Arabidopsis thaliana
ATR0751G216 Amborella trichopoda
Atru.chr6.3424 Acer truncatum
AUR62000128 Chenopodium quinoa
AUR62019308 Chenopodium quinoa
AUR62027077 Chenopodium quinoa
BcaB06g26780 Brassica carinata
BcaC06g35864 Brassica carinata
BolC7t41480H Brassica oleracea
BraA07t28466Z Brassica rapa
C07p10300 Brassica napus
CANSAT01G1761 Cannabis sativa
CARHR102200 Cardamine hirsuta
Carub.0003s2602 Capsella rubella
Ca_18776_v3 Cicer arietinum L.
Cc02_g29600 Coffea canephora
CDE10G0507 Ceratophyllum demersum
Cfa018716 Carpinus fangiana
Ciclev10016955m.g Citrus clementina
CiPaw.01G284700 Carya illinoinensis
ClCG06G018310 Citrullus lanatus
COL.COLO4_17467 Corchorus olitorius
Cpa.g.sc136.41 Carica papaya
CsaV3_1G000130 Cucumis sativus L.
CSS0001120 Camellia sinensis var. sinensis
CSS0020937 Camellia sinensis var. sinensis
CSS0039609 Camellia sinensis var. sinensis
DCAR_008745 Daucus carota
Duzib213G1053 Durio zibethinus
ECA240G0244 Erigeron canadensis
EL10Ac4g10242 Beta vulgaris
Eucgr.K01395 Eucalyptus grandis
FAN04G1041 Fragaria x ananassa
FAN13G2066 Fragaria x ananassa
FAN18G0853 Fragaria x ananassa
FvH4_5g09330 Fragaria vesca
Glyma.07G223300 Glycine max
Glyma.20G022600 Glycine max
Gohir.A01G047200 Gossypium hirsutum
Gohir.D01G037900 Gossypium hirsutum
Gohir.D01G037901 Gossypium hirsutum
Gorai.002G046300 Gossypium raimondii
GSVIVG01018573001 Vitis vinifera
HanXRQChr03g0075001 Helianthus annuus
Haze_07109 Corylus avellana
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla
HPP92_013643 Vanilla planifolia
Hund21535 Selenicereus undatus
Hund30621 Selenicereus undatus
Hund30622 Selenicereus undatus
Lalb_Chr09g0328771 Lupinus albus
Lj1g0005707 Lotus japonicus
Lj8A137G54 Lonicera japonica
Lj9C217G3 Lonicera japonica
Lsat_1_v5_gn_4_24381 Lactuca sativa
Lsat_1_v5_gn_4_72161 Lactuca sativa
Lsat_1_v5_gn_9_102501 Lactuca sativa
Manes.13G060500 Manihot esculenta
Mapoly0084s0063 Marchantia polymorpha
MBI14_g13534_MAGBIO Magnolia biondii
MBI14_g24038_MAGBIO Magnolia biondii
MD06G1132000 Malus domestica
MD14G1148400 Malus domestica
Medtr4g083580 Medicago truncatula
MELO3C026167.2 Cucumis melo
Migut.H01280 Erythranthe guttata
MSTRG.12255 Avicennia marina
Nitab4.5_0005354g0010 Nicotiana tabacum
Nitab4.5_0005376g0020 Nicotiana tabacum
Nn4g22113 Nelumbo nucifera
Oeu015172.1 Olea europaea
Oeu031101.2 Olea europaea
Os09g0478400 Oryza sativa ssp. japonica
Peaxi162Scf00612g00133 Petunia axillaris
PGR031G1532 Punica granatum
PGR044G2338 Punica granatum
Phvul.002G100000 Phaseolus vulgaris
Potri.001G240904 Populus trichocarpa
Potri.001G241100 Populus trichocarpa
Potri.014G169500 Populus trichocarpa
Potri.014G169750 Populus trichocarpa
Pp3c22_13450 Physcomitrium patens
Prupe.5G143000 Prunus persica
Psat7g132520 Pisum sativum
PSO063G1837 Papaver somniferum
PSO063G6961 Papaver somniferum
PSO357G0372 Papaver somniferum
PSO421G0119 Papaver somniferum
PSO421G0324 Papaver somniferum
QL10p000758 Quercus lobata
RcHm_v2.0_Chr7g0188821 Rosa chinensis
Rhsim04G0030300 Rhododendron simsii
Rhsim04G0030400 Rhododendron simsii
Rhsim04G0030600 Rhododendron simsii
Sabra14G0129400 Salix brachista
Sc21g0000460 Simmondsia chinensis
Sed0027705 Sechium edule
SEGI_08222 Sequoiadendron giganteum
SGA_v2.0_scaffold28G12060 Striga asiatica
SGA_v2.0_scaffold2G00813 Striga asiatica
SGA_v2.0_scaffold317G48443 Striga asiatica
SGA_v2.0_scaffold317G48459 Striga asiatica
SGA_v2.0_scaffold317G48460 Striga asiatica
SGA_v2.0_scaffold323G48653 Striga asiatica
SGA_v2.0_scaffold96G29016 Striga asiatica
Solyc07g042710.3 Solanum lycopersicum
Solyc07g045260.3 Solanum lycopersicum
Sopen07g023810 Solanum pennellii
Sp3g23170 Schrenkiella parvula
TAR374G1095 Trochodendron aralioides
Thecc.07G134300 Theobroma cacao
Thhalv10002687m.g Eutrema salsugineum
TPR.G11531 Trifolium pratense
TPR.G34081 Trifolium pratense
TWI18G0239 Tripterygium wilfordii
TWI36G1338 Tripterygium wilfordii
unitig_26.g9513 Utricularia gibba
vmacro09474 Vaccinium macrocarpon
VMungo0251G2804 Vigna mungo
Zm00001eb101470 Zea mays

User provided reference genes

Program Settings