Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p27440 Brassica napus
A09p60680 Brassica napus
Aa31LG4G2110 Aethionema arabicum
Actinidia00647 Actinidia chinensis
Actinidia31124 Actinidia chinensis
Ah.12g061900 Amaranthus hybridus
AL1G28990 Arabidopsis lyrata
AL2G39310 Arabidopsis lyrata
Aqoxy7G02714 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0XD544 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DT0EHL Arachis hypogaea
AT1G16825 Arabidopsis thaliana
AT1G78895 Arabidopsis thaliana
ATR0626G016 Amborella trichopoda
Atru.chr1.2818 Acer truncatum
AUR62001332 Chenopodium quinoa
AUR62025672 Chenopodium quinoa
BcaB02g07184 Brassica carinata
BcaC07g41383 Brassica carinata
BcaC07g41384 Brassica carinata
BcaC07g41456 Brassica carinata
BcaC08g45404 Brassica carinata
BolC6t38199H Brassica oleracea
BolC8t51970H Brassica oleracea
BolC8t51972H Brassica oleracea
BolC8t51973H Brassica oleracea
BraA07t30385Z Brassica rapa
BraA09t41445Z Brassica rapa
C06p30360 Brassica napus
C08p44240 Brassica napus
C08p44260 Brassica napus
C08p44280 Brassica napus
CAN.G1445.2 Capsicum annuum
CAN.G308.17 Capsicum annuum
CANSAT01G2461 Cannabis sativa
CARHR017290 Cardamine hirsuta
CARHR072480 Cardamine hirsuta
Carub.0001s1656 Capsella rubella
Carub.0002s2572 Capsella rubella
Ca_20982_v3 Cicer arietinum L.
CBR_g40779 Chara braunii
CBR_g49429 Chara braunii
Cc04_g00060 Coffea canephora
CDE04G0659 Ceratophyllum demersum
CDE07G0675 Ceratophyllum demersum
Ciclev10032913m.g Citrus clementina
CiPaw.01G208600 Carya illinoinensis
CiPaw.02G129100 Carya illinoinensis
ClCG09G020780 Citrullus lanatus
Cpa.g.sc176.7 Carica papaya
CsaV3_5G025600 Cucumis sativus L.
CSS0046788 Camellia sinensis var. sinensis
DCAR_028944 Daucus carota
Duzib192G1047 Durio zibethinus
Duzib235G0081 Durio zibethinus
ECA234G1813 Erigeron canadensis
EL10Ac7g18137 Beta vulgaris
Eucgr.J00350 Eucalyptus grandis
FAN02G3798 Fragaria x ananassa
FAN05G2575 Fragaria x ananassa
FAN09G0120 Fragaria x ananassa
FvH4_6g36900 Fragaria vesca
Glyma.07G001900 Glycine max
Glyma.08G224900 Glycine max
Gohir.A05G114900 Gossypium hirsutum
Gohir.D05G115300 Gossypium hirsutum
Gorai.009G119400 Gossypium raimondii
GSVIVG01029554001 Vitis vinifera
HanXRQChr10g0311221 Helianthus annuus
HanXRQChr12g0359721 Helianthus annuus
Haze_16187 Corylus avellana
Hma1.2p1_1111F.1_g258450 Hydrangea macrophylla
HPP92_023858 Vanilla planifolia
HPP92_023863 Vanilla planifolia
Hund05672 Selenicereus undatus
Hund18590 Selenicereus undatus
Lalb_Chr01g0011651 Lupinus albus
Lj3g0021821 Lotus japonicus
Lj6P639T26 Lonicera japonica
Lj9P718T21 Lonicera japonica
Lsat_1_v5_gn_5_137201 Lactuca sativa
Manes.06G179601 Manihot esculenta
Mapoly0045s0143 Marchantia polymorpha
MBI16_g18210_MAGBIO Magnolia biondii
MD09G1166000 Malus domestica
MD17G1161700 Malus domestica
Medtr4g005340 Medicago truncatula
MELO3C002923.2 Cucumis melo
Migut.D00888 Erythranthe guttata
MSTRG.4523 Avicennia marina
MSTRG.9559 Avicennia marina
Nitab4.5_0001708g0020 Nicotiana tabacum
Nitab4.5_0002354g0080 Nicotiana tabacum
Nitab4.5_0003757g0060 Nicotiana tabacum
Nitab4.5_0007226g0010 Nicotiana tabacum
Nn8g41003 Nelumbo nucifera
Oeu049628.2 Olea europaea
Os08g0225100 Oryza sativa ssp. japonica
Peaxi162Scf00084g00024 Petunia axillaris
PGR031G1139 Punica granatum
PGSC0003DMG400001840 Solanum tuberosum
PGSC0003DMG400026509 Solanum tuberosum
Phvul.010G164400 Phaseolus vulgaris
Potri.008G004200 Populus trichocarpa
Pp3c24_12140 Physcomitrium patens
Pp3c8_16360 Physcomitrium patens
Prupe.3G023400 Prunus persica
Prupe.3G058300 Prunus persica
Prupe.5G038700 Prunus persica
Psat7g265160 Pisum sativum
PSO063G3520 Papaver somniferum
PSO170G0292 Papaver somniferum
QL05p088862 Quercus lobata
RcHm_v2.0_Chr2g0149331 Rosa chinensis
Sabra08G0001700 Salix brachista
Sabra08G0001800 Salix brachista
SalBow4G0561 Salvia bowleyana
Sc15g0001130 Simmondsia chinensis
Sed0017383 Sechium edule
SEGI_27689 Sequoiadendron giganteum
SEGI_33936 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02105 Striga asiatica
SMO215G0002 Selaginella moellendorffii
Solyc08g077470.4 Solanum lycopersicum
Sopen06g022820 Solanum pennellii
Sopen08g026060 Solanum pennellii
Sp1g14960 Schrenkiella parvula
Sp5g33910 Schrenkiella parvula
TAR626G0082 Trochodendron aralioides
THA.LOC104808103 Tarenaya hassleriana
Thecc.06G056000 Theobroma cacao
Thhalv10009539m.g Eutrema salsugineum
Thhalv10019242m.g Eutrema salsugineum
TPR.G38774 Trifolium pratense
TWI75G0478 Tripterygium wilfordii
vmacro12582 Vaccinium macrocarpon
VMungo0331G1663 Vigna mungo
Zm00001eb414080 Zea mays

User provided reference genes

Program Settings