Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p09820 Brassica napus
Aa31LG1G1170 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.168 Anthoceros agrestis
Actinidia16167 Actinidia chinensis
Ah.12g059120 Amaranthus hybridus
AL1G25570 Arabidopsis lyrata
Aqoxy1G03249 Aquilegia oxysepala
Aqoxy3G03640 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0F7ZXJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H69QIP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HQ8LD6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MYF1K6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TQ64T1 Arachis hypogaea
AT1G13770 Arabidopsis thaliana
ATR0907G009 Amborella trichopoda
Atru.BG.280.p Acer truncatum
Atru.chr11.1627 Acer truncatum
Atru.chr11.1628 Acer truncatum
AUR62030755 Chenopodium quinoa
AUR62036400 Chenopodium quinoa
BcaB02g06475 Brassica carinata
BcaC05g25284 Brassica carinata
BolC5t29908H Brassica oleracea
BraA06t24172Z Brassica rapa
C05p11620 Brassica napus
CAN.G616.43 Capsicum annuum
CANSAT64G0560 Cannabis sativa
CARHR014160 Cardamine hirsuta
Carub.0001s1349 Capsella rubella
Ca_04974_v3 Cicer arietinum L.
Ca_27228_v3 Cicer arietinum L.
CBR_g29960 Chara braunii
Cc11_g11980 Coffea canephora
CDE05G1057 Ceratophyllum demersum
Ciclev10031554m.g Citrus clementina
CiPaw.05G125400 Carya illinoinensis
ClCG08G010410 Citrullus lanatus
COL.COLO4_21092 Corchorus olitorius
COL.COLO4_27886 Corchorus olitorius
Cpa.g.sc1.123 Carica papaya
Cre16.g671150 Chlamydomonas reinhardtii
CsaV3_6G033680 Cucumis sativus L.
CSS0033582 Camellia sinensis var. sinensis
CSS0039095 Camellia sinensis var. sinensis
DCAR_007195 Daucus carota
DCAR_030041 Daucus carota
Dinv16731 Davidia involucrata
Duzib248G1426 Durio zibethinus
Duzib248G1642 Durio zibethinus
Duzib251G0915 Durio zibethinus
ECA233G1797 Erigeron canadensis
EL10Ac5g12478 Beta vulgaris
Eucgr.B03151 Eucalyptus grandis
FAN07G0232 Fragaria x ananassa
FAN12G3709 Fragaria x ananassa
FAN17G2544 Fragaria x ananassa
FAN22G1579 Fragaria x ananassa
FvH4_4g30090 Fragaria vesca
Glyma.01G059200 Glycine max
Glyma.02G116567 Glycine max
Glyma.02G116633 Glycine max
Gohir.A12G161300 Gossypium hirsutum
Gohir.D12G164600 Gossypium hirsutum
Gorai.008G177200 Gossypium raimondii
GSVIVG01012218001 Vitis vinifera
GSVIVG01031104001 Vitis vinifera
GSVIVG01031110001 Vitis vinifera
GSVIVG01031111001 Vitis vinifera
HanXRQChr08g0211781 Helianthus annuus
Haze_11911 Corylus avellana
Hma1.2p1_0354F.1_g133380 Hydrangea macrophylla
Hma1.2p1_0566F.1_g179750 Hydrangea macrophylla
HPP92_024922 Vanilla planifolia
HPP92_024923 Vanilla planifolia
Hund10887 Selenicereus undatus
Lalb_Chr10g0098831 Lupinus albus
Lj2g0009100 Lotus japonicus
Lj2g0017860 Lotus japonicus
Lj6A779T68 Lonicera japonica
Lj6g0027042 Lotus japonicus
Lsat_1_v5_gn_8_46541 Lactuca sativa
Manes.01G027700 Manihot esculenta
Mapoly0001s0066 Marchantia polymorpha
MBI16_g24180_MAGBIO Magnolia biondii
MCO13G536 Micromonas commoda
MD16G1061400 Malus domestica
Medtr5g044720 Medicago truncatula
MELO3C011420.2 Cucumis melo
Migut.L01192 Erythranthe guttata
Nitab4.5_0000231g0340 Nicotiana tabacum
Nitab4.5_0001487g0140 Nicotiana tabacum
Nitab4.5_0004308g0080 Nicotiana tabacum
Nitab4.5_0007976g0020 Nicotiana tabacum
Nn3g17444 Nelumbo nucifera
Oeu004582.1 Olea europaea
Oeu025279.1 Olea europaea
Os03g0213700 Oryza sativa ssp. japonica
Peaxi162Scf00175g00125 Petunia axillaris
PGR102G3278 Punica granatum
PGSC0003DMG400028318 Solanum tuberosum
Phvul.003G042500 Phaseolus vulgaris
Potri.008G095700 Populus trichocarpa
Pp3c17_20490 Physcomitrium patens
PRCOL_00005711 Prasinoderma coloniale
Prupe.1G286700 Prunus persica
Psat2g130160 Pisum sativum
PSO017G2580 Papaver somniferum
PSO478G2131 Papaver somniferum
QL03p072672 Quercus lobata
QL12p030796 Quercus lobata
RcHm_v2.0_Chr4g0438371 Rosa chinensis
RcHm_v2.0_Chr4g0438381 Rosa chinensis
RcHm_v2.0_Chr4g0438391 Rosa chinensis
Rhsim09G0127600 Rhododendron simsii
Sabra08G0072100 Salix brachista
SalBow2G0760 Salvia bowleyana
SalBow6G3147 Salvia bowleyana
SalBow7G2616 Salvia bowleyana
Sc11g0002440 Simmondsia chinensis
Sed0026263 Sechium edule
SEGI_02746 Sequoiadendron giganteum
SEGI_27210 Sequoiadendron giganteum
SGA_v2.0_scaffold36G14456 Striga asiatica
SMO343G0031 Selaginella moellendorffii
SMO367G0699 Selaginella moellendorffii
Solyc05g012290.3 Solanum lycopersicum
Sopen05g007120 Solanum pennellii
Sp1g12160 Schrenkiella parvula
TAR622G0890 Trochodendron aralioides
THA.LOC104824056 Tarenaya hassleriana
Thecc.02G330600 Theobroma cacao
Thhalv10007655m.g Eutrema salsugineum
TPR.G24479 Trifolium pratense
TWI31G1152 Tripterygium wilfordii
unitig_22.g6492 Utricularia gibba
vmacro10423 Vaccinium macrocarpon
VMungo1215G2929 Vigna mungo
Zm00001eb400240 Zea mays

User provided reference genes

Program Settings