Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p15570 Brassica napus
A10p14750 Brassica napus
Aa31LG8G16860 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3897 Anthoceros agrestis
Actinidia17845 Actinidia chinensis
Actinidia17846 Actinidia chinensis
Actinidia17880 Actinidia chinensis
Ah.13g074710 Amaranthus hybridus
AL3G48260 Arabidopsis lyrata
Aqoxy5G01421 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4TQ1KW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q8AXKZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZFI36T Arachis hypogaea
AT2G19940 Arabidopsis thaliana
ATR0225G001 Amborella trichopoda
Atru.chr5.2830 Acer truncatum
AUR62035865 Chenopodium quinoa
AUR62042921 Chenopodium quinoa
BcaB07g31395 Brassica carinata
BcaC04g19978 Brassica carinata
BcaC04g22480 Brassica carinata
BolC9t54784H Brassica oleracea
BolC9t57765H Brassica oleracea
BraA09t37197Z Brassica rapa
C09p18820 Brassica napus
C09p49210 Brassica napus
CAN.G322.41 Capsicum annuum
CANSAT25G3890 Cannabis sativa
CARHR110380 Cardamine hirsuta
Carub.0003s3419 Capsella rubella
Ca_12473_v3 Cicer arietinum L.
CBR_g5649 Chara braunii
Cc07_g19550 Coffea canephora
CDE01G0106 Ceratophyllum demersum
Cfa005417 Carpinus fangiana
Cfa027024 Carpinus fangiana
Ciclev10028560m.g Citrus clementina
CiPaw.05G055600 Carya illinoinensis
ClCG09G017590 Citrullus lanatus
COL.COLO4_11726 Corchorus olitorius
Cpa.g.sc26.106 Carica papaya
Cpa.g.sc62.56 Carica papaya
Cpa.g.sc62.58 Carica papaya
Cre03.g146187 Chlamydomonas reinhardtii
CsaV3_2G014210 Cucumis sativus L.
CSS0029422 Camellia sinensis var. sinensis
CSS0049808 Camellia sinensis var. sinensis
DCAR_021731 Daucus carota
DCAR_022068 Daucus carota
Dinv23596 Davidia involucrata
Duzib248G1341 Durio zibethinus
ECA240G1421 Erigeron canadensis
EL10Ac1g01621 Beta vulgaris
EL10Ac3g06682 Beta vulgaris
Eucgr.I01182 Eucalyptus grandis
FAN15G1080 Fragaria x ananassa
FAN24G3180 Fragaria x ananassa
FAN27G1497 Fragaria x ananassa
FAN27G3443 Fragaria x ananassa
FvH4_2g07021 Fragaria vesca
Glyma.07G179700 Glycine max
Glyma.08G079000 Glycine max
Glyma.08G079050 Glycine max
Glyma.20G009400 Glycine max
Gohir.A13G037500 Gossypium hirsutum
Gohir.D13G035800 Gossypium hirsutum
Gorai.013G040500 Gossypium raimondii
GSVIVG01031808001 Vitis vinifera
HanXRQChr10g0318401 Helianthus annuus
HanXRQChr13g0402421 Helianthus annuus
HanXRQChr16g0528561 Helianthus annuus
Haze_01878 Corylus avellana
Hma1.2p1_0584F.1_g183170 Hydrangea macrophylla
HPP92_018726 Vanilla planifolia
Hund01581 Selenicereus undatus
Lalb_Chr17g0338301 Lupinus albus
Lj2g0016235 Lotus japonicus
Lj9A361T59 Lonicera japonica
Lsat_1_v5_gn_9_108961 Lactuca sativa
Manes.15G144000 Manihot esculenta
Mapoly0036s0058 Marchantia polymorpha
MBI16_g19905_MAGBIO Magnolia biondii
MD00G1050500 Malus domestica
MD10G1088500 Malus domestica
Medtr1g012540 Medicago truncatula
MELO3C021919.2 Cucumis melo
Migut.B00304 Erythranthe guttata
MSTRG.5375 Avicennia marina
Nitab4.5_0001401g0050 Nicotiana tabacum
Nitab4.5_0003726g0070 Nicotiana tabacum
Nn1g04154 Nelumbo nucifera
Oeu021926.1 Olea europaea
Oeu057671.1 Olea europaea
Os03g0617900 Oryza sativa ssp. japonica
Os10g0494200 Oryza sativa ssp. japonica
Peaxi162Scf00016g01531 Petunia axillaris
PGR142G1983 Punica granatum
PGSC0003DMG401025903 Solanum tuberosum
PGSC0003DMG402025903 Solanum tuberosum
Phvul.003G012000 Phaseolus vulgaris
Potri.004G145700 Populus trichocarpa
Pp3c24_19140 Physcomitrium patens
Pp3c8_22120 Physcomitrium patens
PRCOL_00005741 Prasinoderma coloniale
Prupe.8G115600 Prunus persica
Psat6g096120 Pisum sativum
PSO170G1474 Papaver somniferum
PSO210G1477 Papaver somniferum
PSO384G1669 Papaver somniferum
QL11p038618 Quercus lobata
RcHm_v2.0_Chr6g0259381 Rosa chinensis
Rhsim05G0079900 Rhododendron simsii
SalBow3G1434 Salvia bowleyana
SalBow4G0329 Salvia bowleyana
Sc06g0001440 Simmondsia chinensis
Sed0010996 Sechium edule
SEGI_28239 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13119 Striga asiatica
SMO116G0475 Selaginella moellendorffii
Solyc01g108660.4 Solanum lycopersicum
Sopen01g050880 Solanum pennellii
Sp3g33250 Schrenkiella parvula
TAR381G1284 Trochodendron aralioides
TAR625G0430 Trochodendron aralioides
THA.LOC104814570 Tarenaya hassleriana
Thecc.02G095000 Theobroma cacao
Thhalv10002012m.g Eutrema salsugineum
Thhalv10023506m.g Eutrema salsugineum
TPR.G11154 Trifolium pratense
TPR.G14858 Trifolium pratense
TPR.G14864 Trifolium pratense
TPR.G14865 Trifolium pratense
TWI79G1184 Tripterygium wilfordii
unitig_26.g10242 Utricularia gibba
vmacro19466 Vaccinium macrocarpon
vmacro23230 Vaccinium macrocarpon
VMungo1215G0206 Vigna mungo
Zm00001eb051410 Zea mays

User provided reference genes

Program Settings