Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18820 Brassica napus
A07p42110 Brassica napus
Aa31LG4G6530 Aethionema arabicum
Aa31LG9G13560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1400 Anthoceros agrestis
Actinidia15523 Actinidia chinensis
Actinidia17075 Actinidia chinensis
Ah.01g024690 Amaranthus hybridus
Ah.03g148440 Amaranthus hybridus
Ah.11g041970 Amaranthus hybridus
AL2G36580 Arabidopsis lyrata
AL4G29300 Arabidopsis lyrata
Aqoxy6G02983 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MFDH98 Arachis hypogaea
AT2G33630 Arabidopsis thaliana
ATR0605G082 Amborella trichopoda
Atru.chr13.62 Acer truncatum
AUR62024097 Chenopodium quinoa
AUR62035169 Chenopodium quinoa
BcaB01g03926 Brassica carinata
BcaC01g05830 Brassica carinata
BcaC08g47151 Brassica carinata
BcaC08g47244 Brassica carinata
BolC3t14582H Brassica oleracea
BolC6t40094H Brassica oleracea
BraA03t11142Z Brassica rapa
BraA07t31740Z Brassica rapa
C03p21990 Brassica napus
C06p50680 Brassica napus
CAN.G1330.11 Capsicum annuum
CANSAT25G2267 Cannabis sativa
CARHR127640 Cardamine hirsuta
Carub.0002s2336 Capsella rubella
Carub.0004s1526 Capsella rubella
Ca_13494_v3 Cicer arietinum L.
Ca_30151_v3 Cicer arietinum L.
Cc10_g00280 Coffea canephora
Cc11_g02180 Coffea canephora
CDE05G0939 Ceratophyllum demersum
CDE05G2847 Ceratophyllum demersum
CDE10G0210 Ceratophyllum demersum
CDE10G0878 Ceratophyllum demersum
Cfa014135 Carpinus fangiana
Ciclev10001002m.g Citrus clementina
CiPaw.07G133700 Carya illinoinensis
ClCG11G019030 Citrullus lanatus
COL.COLO4_12311 Corchorus olitorius
Cpa.g.sc26.16 Carica papaya
Cre09.g401500 Chlamydomonas reinhardtii
Cre16.g678773 Chlamydomonas reinhardtii
CsaV3_4G037630 Cucumis sativus L.
CSS0028031 Camellia sinensis var. sinensis
CSS0038076 Camellia sinensis var. sinensis
DCAR_023024 Daucus carota
Dinv13752 Davidia involucrata
Duzib116G0447 Durio zibethinus
ECA238G3676 Erigeron canadensis
EL10Ac1g01873 Beta vulgaris
Eucgr.F01812 Eucalyptus grandis
FAN08G1655 Fragaria x ananassa
FAN13G1149 Fragaria x ananassa
FAN18G2825 Fragaria x ananassa
FAN18G3125 Fragaria x ananassa
FAN18G3488 Fragaria x ananassa
FvH4_5g26130 Fragaria vesca
FvH4_5g26160 Fragaria vesca
FvH4_5g26170 Fragaria vesca
Glyma.14G223900 Glycine max
Glyma.17G262100 Glycine max
Gohir.A01G102000 Gossypium hirsutum
Gohir.D01G087100 Gossypium hirsutum
Gorai.002G112800 Gossypium raimondii
GSVIVG01013425001 Vitis vinifera
HanXRQChr06g0185311 Helianthus annuus
Haze_22861 Corylus avellana
Hma1.2p1_0699F.1_g205720 Hydrangea macrophylla
HPP92_020525 Vanilla planifolia
HPP92_020534 Vanilla planifolia
Hund01836 Selenicereus undatus
Lalb_Chr01g0008311 Lupinus albus
Lj4A5T46 Lonicera japonica
Lj5g0020249 Lotus japonicus
Lsat_1_v5_gn_2_3240 Lactuca sativa
Manes.18G002100 Manihot esculenta
MBI01_g28397_MAGBIO Magnolia biondii
MD06G1004300 Malus domestica
Medtr1g026540 Medicago truncatula
MELO3C017057.2 Cucumis melo
Migut.N02985 Erythranthe guttata
MSTRG.24514 Avicennia marina
Nitab4.5_0001756g0040 Nicotiana tabacum
Nn5g31046 Nelumbo nucifera
Oeu035757.2 Olea europaea
Os02g0715200 Oryza sativa ssp. japonica
Peaxi162Scf00269g00414 Petunia axillaris
Peaxi162Scf00680g00636 Petunia axillaris
PGR031G1403 Punica granatum
PGSC0003DMG400009923 Solanum tuberosum
Phvul.001G000700 Phaseolus vulgaris
Potri.002G005100 Populus trichocarpa
Potri.002G005201 Populus trichocarpa
Pp3c12_23240 Physcomitrium patens
Pp3c1_16840 Physcomitrium patens
Prupe.5G005700 Prunus persica
Psat0s1355g0040 Pisum sativum
PSO541G1320 Papaver somniferum
PSO541G1621 Papaver somniferum
PSO675G8223 Papaver somniferum
PSO675G8730 Papaver somniferum
QL02p015726 Quercus lobata
RcHm_v2.0_Chr7g0216661 Rosa chinensis
RcHm_v2.0_Chr7g0216671 Rosa chinensis
Rhsim06G0003400 Rhododendron simsii
Sabra02G0003500 Salix brachista
Sabra02G0003600 Salix brachista
SalBow6G6240 Salvia bowleyana
Sc26g0004750 Simmondsia chinensis
Sed0000545 Sechium edule
SEGI_07319 Sequoiadendron giganteum
SEGI_28534 Sequoiadendron giganteum
SEGI_39851 Sequoiadendron giganteum
SGA_v2.0_scaffold227G43160 Striga asiatica
SMO147G0007 Selaginella moellendorffii
Solyc04g082750.3 Solanum lycopersicum
Sopen04g036390 Solanum pennellii
Sp4g15980 Schrenkiella parvula
Sp5g31610 Schrenkiella parvula
TAR381G1403 Trochodendron aralioides
THA.LOC104806872 Tarenaya hassleriana
Thecc.08G100000 Theobroma cacao
Thhalv10016587m.g Eutrema salsugineum
Thhalv10018454m.g Eutrema salsugineum
TPR.G26383 Trifolium pratense
TWI56G0785 Tripterygium wilfordii
unitig_22.g5730 Utricularia gibba
vmacro21769 Vaccinium macrocarpon
VMungo0647G1813 Vigna mungo
Zm00001eb252680 Zea mays

User provided reference genes

Program Settings