Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p17130 Brassica napus
A08p29100 Brassica napus
Aa31LG7G5210 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2923 Anthoceros agrestis
Actinidia15539 Actinidia chinensis
Ah.08g212310 Amaranthus hybridus
AL1G34110 Arabidopsis lyrata
AL5G16180 Arabidopsis lyrata
AL8G17720 Arabidopsis lyrata
Aqoxy5G00965 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.09GV4T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8D2970 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GVHP98 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H4MLSW Arachis hypogaea
AT1G21065 Arabidopsis thaliana
ATR0605G185 Amborella trichopoda
Atru.chr13.17 Acer truncatum
AUR62041000 Chenopodium quinoa
AUR62043796 Chenopodium quinoa
BcaB03g12837 Brassica carinata
BcaB07g32099 Brassica carinata
BcaC05g26014 Brassica carinata
BcaC07g39073 Brassica carinata
BcaC07g39074 Brassica carinata
BolC8t49687H Brassica oleracea
BraA06t24816Z Brassica rapa
BraA08t34846Z Brassica rapa
C05p19780 Brassica napus
C08p20580 Brassica napus
CAN.G208.43 Capsicum annuum
CANSAT25G0089 Cannabis sativa
CARHR021510 Cardamine hirsuta
Carub.0001s2052 Capsella rubella
Ca_18758_v3 Cicer arietinum L.
CBR_g570 Chara braunii
Cc10_g00070 Coffea canephora
Cfa014170 Carpinus fangiana
Cfa023908 Carpinus fangiana
Ciclev10002303m.g Citrus clementina
CiPaw.07G129900 Carya illinoinensis
CiPaw.08G079200 Carya illinoinensis
ClCG11G019260 Citrullus lanatus
COL.COLO4_12262 Corchorus olitorius
Cpa.g.sc36.93 Carica papaya
Cpa.g.sc36.94 Carica papaya
Cre01.g043100 Chlamydomonas reinhardtii
Cre09.g396850 Chlamydomonas reinhardtii
Cre17.g739300 Chlamydomonas reinhardtii
CsaV3_4G037850 Cucumis sativus L.
CSS0024776 Camellia sinensis var. sinensis
DCAR_022964 Daucus carota
Dinv05517 Davidia involucrata
Duzib116G0928 Durio zibethinus
ECA238G0376 Erigeron canadensis
EL10Ac7g17248 Beta vulgaris
Eucgr.F01955 Eucalyptus grandis
FAN04G1408 Fragaria x ananassa
FAN08G1374 Fragaria x ananassa
FAN18G4437 Fragaria x ananassa
FvH4_5g26780 Fragaria vesca
Glyma.07G221200 Glycine max
Glyma.15G161100 Glycine max
Gohir.A05G177400 Gossypium hirsutum
Gohir.D05G180800 Gossypium hirsutum
Gorai.009G185800 Gossypium raimondii
GSVIVG01013466001 Vitis vinifera
HanXRQChr14g0427511 Helianthus annuus
Haze_22894 Corylus avellana
Hma1.2p1_0914F.1_g236230 Hydrangea macrophylla
HPP92_017798 Vanilla planifolia
HPP92_021698 Vanilla planifolia
HPP92_021704 Vanilla planifolia
Hund05339 Selenicereus undatus
Lalb_Chr05g0219661 Lupinus albus
Lalb_Chr15g0083971 Lupinus albus
Lj4C814G4 Lonicera japonica
Lj4g0004166 Lotus japonicus
Lsat_1_v5_gn_2_2740 Lactuca sativa
Manes.18G000600 Manihot esculenta
Mapoly0002s0034 Marchantia polymorpha
Mapoly0065s0101 Marchantia polymorpha
MCO09G054 Micromonas commoda
MCO09G751 Micromonas commoda
MD06G1057400 Malus domestica
MD07G1016000 Malus domestica
Medtr4g084120 Medicago truncatula
MELO3C017079.2 Cucumis melo
Migut.N03003 Erythranthe guttata
MSTRG.24533 Avicennia marina
Nitab4.5_0001309g0160 Nicotiana tabacum
Nitab4.5_0003423g0040 Nicotiana tabacum
Nn6g31548 Nelumbo nucifera
Oeu000735.2 Olea europaea
Os02g0187500 Oryza sativa ssp. japonica
Os06g0638200 Oryza sativa ssp. japonica
Peaxi162Scf00064g01422 Petunia axillaris
Peaxi162Scf00064g01430 Petunia axillaris
PGR083G0867 Punica granatum
PGSC0003DMG400029397 Solanum tuberosum
Phvul.002G097800 Phaseolus vulgaris
Phvul.009G240200 Phaseolus vulgaris
Potri.002G001500 Populus trichocarpa
Pp3c1_31360 Physcomitrium patens
Pp3c2_25680 Physcomitrium patens
PRCOL_00001425 Prasinoderma coloniale
PRCOL_00001511 Prasinoderma coloniale
Prupe.5G000700 Prunus persica
Prupe.5G000800 Prunus persica
Psat7g129880 Pisum sativum
PSO017G1036 Papaver somniferum
PSO170G6225 Papaver somniferum
QL02p016334 Quercus lobata
RcHm_v2.0_Chr7g0217691 Rosa chinensis
Rhsim06G0000500 Rhododendron simsii
Sabra02G0001000 Salix brachista
SalBow6G6347 Salvia bowleyana
Sc17g0004140 Simmondsia chinensis
Sed0017561 Sechium edule
SEGI_39286 Sequoiadendron giganteum
SEGI_40156 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08925 Striga asiatica
SGA_v2.0_scaffold25G11031 Striga asiatica
SMO203G0115 Selaginella moellendorffii
SMO259G0018 Selaginella moellendorffii
Solyc12g095770.2 Solanum lycopersicum
Sopen12g031670 Solanum pennellii
Sp1g18730 Schrenkiella parvula
TAR376G0283 Trochodendron aralioides
TAR381G1539 Trochodendron aralioides
THA.LOC104813721 Tarenaya hassleriana
Thecc.08G097300 Theobroma cacao
Thhalv10008709m.g Eutrema salsugineum
TPR.G20977 Trifolium pratense
TWI12G1391 Tripterygium wilfordii
vmacro21735 Vaccinium macrocarpon
VMungo0251G0776 Vigna mungo
Zm00001eb234660 Zea mays
Zm00001eb387340 Zea mays

User provided reference genes

Program Settings