Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p15270 Brassica napus
A08p29990 Brassica napus
Aa31LG7G3880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4614 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5739 Anthoceros agrestis
Actinidia30238 Actinidia chinensis
Actinidia39641 Actinidia chinensis
AL1G31720 Arabidopsis lyrata
Aqoxy3G00735 Aquilegia oxysepala
Aqoxy7G00284 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.568RE3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.56M64E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.67TMSF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C56SYK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CV9S7K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D619LQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KDZ9D9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L7J4LP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WCQ4SR Arachis hypogaea
AT1G19140 Arabidopsis thaliana
ATR1100G017 Amborella trichopoda
Atru.chr7.1734 Acer truncatum
AUR62025296 Chenopodium quinoa
AUR62028302 Chenopodium quinoa
BcaB03g12932 Brassica carinata
BcaB03g12934 Brassica carinata
BcaB07g31927 Brassica carinata
BcaC05g25811 Brassica carinata
BcaC07g38981 Brassica carinata
BolC5t30454H Brassica oleracea
BolC8t49542H Brassica oleracea
BraA06t24641Z Brassica rapa
BraA07t29264Z Brassica rapa
BraA08t34934Z Brassica rapa
C05p17510 Brassica napus
C08p19230 Brassica napus
CAN.G32.9 Capsicum annuum
CANSAT56G2230 Cannabis sativa
CANSAT56G3371 Cannabis sativa
CARHR019740 Cardamine hirsuta
Carub.0001s1877 Capsella rubella
Ca_09310_v3 Cicer arietinum L.
CBR_g19881 Chara braunii
Cc06_g12460 Coffea canephora
CDE05G0257 Ceratophyllum demersum
CDE11G0650 Ceratophyllum demersum
Ciclev10009013m.g Citrus clementina
CiPaw.03G203700 Carya illinoinensis
ClCG03G014930 Citrullus lanatus
COL.COLO4_18069 Corchorus olitorius
Cpa.g.sc28.12 Carica papaya
Cre06.g269550 Chlamydomonas reinhardtii
CsaV3_1G041220 Cucumis sativus L.
CSS0008332 Camellia sinensis var. sinensis
CSS0017494 Camellia sinensis var. sinensis
DCAR_024765 Daucus carota
Dinv25539 Davidia involucrata
Dinv42413 Davidia involucrata
Duzib168G0027 Durio zibethinus
Duzib187G0437 Durio zibethinus
ECA234G3626 Erigeron canadensis
EL10Ac8g19008 Beta vulgaris
Eucgr.C00788 Eucalyptus grandis
FAN01G0749 Fragaria x ananassa
FAN03G2003 Fragaria x ananassa
FAN10G0153 Fragaria x ananassa
FAN10G4084 Fragaria x ananassa
FvH4_7g05500 Fragaria vesca
Glyma.13G111700 Glycine max
Glyma.17G048000 Glycine max
Gohir.A06G078200 Gossypium hirsutum
Gohir.D06G077200 Gossypium hirsutum
Gorai.010G090300 Gossypium raimondii
GSVIVG01015048001 Vitis vinifera
HanXRQChr12g0354431 Helianthus annuus
Hma1.2p1_0169F.1_g074410 Hydrangea macrophylla
HPP92_013279 Vanilla planifolia
Hund26090 Selenicereus undatus
Lalb_Chr07g0181281 Lupinus albus
Lalb_Chr13g0299361 Lupinus albus
Lj2g0003057 Lotus japonicus
Lj4g0021187 Lotus japonicus
Lj7A689T78 Lonicera japonica
Lsat_1_v5_gn_5_139800 Lactuca sativa
Manes.03G042000 Manihot esculenta
Mapoly0016s0081 Marchantia polymorpha
MBI13_g00695_MAGBIO Magnolia biondii
MBI13_g00696_MAGBIO Magnolia biondii
MCO02G393 Micromonas commoda
MD02G1257100 Malus domestica
MD07G1063400 Malus domestica
Medtr4g125000 Medicago truncatula
MELO3C015535.2 Cucumis melo
Migut.J00918 Erythranthe guttata
Migut.J00920 Erythranthe guttata
Migut.J00958 Erythranthe guttata
MSTRG.10500 Avicennia marina
Nitab4.5_0000343g0390 Nicotiana tabacum
Nitab4.5_0008784g0050 Nicotiana tabacum
Nn1g06537 Nelumbo nucifera
Os03g0405100 Oryza sativa ssp. japonica
Peaxi162Scf00880g00018 Petunia axillaris
PGR142G2674 Punica granatum
PGSC0003DMG400016040 Solanum tuberosum
Phvul.003G129500 Phaseolus vulgaris
Potri.006G139800 Populus trichocarpa
Pp3c26_10620 Physcomitrium patens
PRCOL_00004586 Prasinoderma coloniale
Prupe.2G075400 Prunus persica
Psat7g057840 Pisum sativum
PSO386G0114 Papaver somniferum
PSO724G0807 Papaver somniferum
QL11p001232 Quercus lobata
RcHm_v2.0_Chr1g0332351 Rosa chinensis
Sabra06G0109200 Salix brachista
SalBow6G3747 Salvia bowleyana
Sc18g0002770 Simmondsia chinensis
Sed0003389 Sechium edule
SEGI_32471 Sequoiadendron giganteum
SGA_v2.0_scaffold296G47553 Striga asiatica
SGA_v2.0_scaffold31G12665 Striga asiatica
SHI52085 Sapria himalayana
SMO364G0522 Selaginella moellendorffii
Solyc07g042150.3 Solanum lycopersicum
Sopen07g021740 Solanum pennellii
Sp1g17050 Schrenkiella parvula
TAR624G0952 Trochodendron aralioides
TAR626G1135 Trochodendron aralioides
THA.LOC104815688 Tarenaya hassleriana
Thecc.08G180200 Theobroma cacao
Thecc.09G074000 Theobroma cacao
Thhalv10008278m.g Eutrema salsugineum
TPR.G12564 Trifolium pratense
TWI32G1325 Tripterygium wilfordii
TWI63G1120 Tripterygium wilfordii
unitig_85.g27246 Utricularia gibba
VMungo1215G1068 Vigna mungo
Zm00001eb019520 Zea mays

User provided reference genes

Program Settings