Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p64710 Brassica napus
Aa31LG6G13810 Aethionema arabicum
Actinidia12065 Actinidia chinensis
Ah.11g041060 Amaranthus hybridus
AL7G13990 Arabidopsis lyrata
Aqoxy6G00889 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.21BGDZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A2BBUY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ENA0P5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S73BBB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SHY03S Arachis hypogaea
AT4G37190 Arabidopsis thaliana
ATR0767G265 Amborella trichopoda
Atru.chr2.470 Acer truncatum
Atru.chr3.423 Acer truncatum
Atru.chr3.424 Acer truncatum
AUR62001963 Chenopodium quinoa
AUR62003843 Chenopodium quinoa
BcaNung03946 Brassica carinata
BcaNung04273 Brassica carinata
BolC1t00209H Brassica oleracea
BolC7t46629H Brassica oleracea
BraA03t15535Z Brassica rapa
C01p02170 Brassica napus
C07p62120 Brassica napus
CAN.G1273.15 Capsicum annuum
CANSAT64G0631 Cannabis sativa
CARHR245320 Cardamine hirsuta
Carub.0007s0338 Capsella rubella
Ca_24792_v3 Cicer arietinum L.
CBR_g38209 Chara braunii
Cc02_g34610 Coffea canephora
CDE04G2042 Ceratophyllum demersum
CDE06G0261 Ceratophyllum demersum
Cfa003976 Carpinus fangiana
Cfa026632 Carpinus fangiana
Ciclev10025258m.g Citrus clementina
CiPaw.01G023200 Carya illinoinensis
ClCG01G016650 Citrullus lanatus
COL.COLO4_11363 Corchorus olitorius
Cpa.g.sc6.394 Carica papaya
Cpa.g.sc6.396 Carica papaya
Cre01.g043700 Chlamydomonas reinhardtii
CsaV3_6G043060 Cucumis sativus L.
CSS0023439 Camellia sinensis var. sinensis
CSS0024475 Camellia sinensis var. sinensis
CSS0032711 Camellia sinensis var. sinensis
CSS0040680 Camellia sinensis var. sinensis
DCAR_010923 Daucus carota
Dinv39890 Davidia involucrata
Duzib264G1173 Durio zibethinus
ECA232G0422 Erigeron canadensis
Eucgr.I00976 Eucalyptus grandis
FAN08G3227 Fragaria x ananassa
FAN18G3771 Fragaria x ananassa
FAN19G0212 Fragaria x ananassa
FAN26G2590 Fragaria x ananassa
FAN28G0665 Fragaria x ananassa
FvH4_1g15480 Fragaria vesca
FvH4_5g33501 Fragaria vesca
FvH4_5g33502 Fragaria vesca
Glyma.01G183800 Glycine max
Glyma.11G058500 Glycine max
Gohir.A11G189700 Gossypium hirsutum
Gohir.D11G196500 Gossypium hirsutum
Gorai.007G210400 Gossypium raimondii
GSVIVG01003549001 Vitis vinifera
HanXRQChr04g0119841 Helianthus annuus
HanXRQChr04g0119851 Helianthus annuus
HanXRQChr14g0430701 Helianthus annuus
Haze_15444 Corylus avellana
Hma1.2p1_0873F.1_g231280 Hydrangea macrophylla
Hma1.2p1_0873F.1_g231290 Hydrangea macrophylla
HPP92_017765 Vanilla planifolia
Hund16313 Selenicereus undatus
Lalb_Chr05g0213171 Lupinus albus
Lj2g0010083 Lotus japonicus
Lj4C139G4 Lonicera japonica
Lj6g0016933 Lotus japonicus
Lsat_1_v5_gn_4_168700 Lactuca sativa
Manes.16G089500 Manihot esculenta
Mapoly0024s0139 Marchantia polymorpha
MCO05G662 Micromonas commoda
MD02G1166800 Malus domestica
MD15G1279300 Malus domestica
Medtr5g017970 Medicago truncatula
MELO3C007542.2 Cucumis melo
MSTRG.5133 Avicennia marina
Nitab4.5_0000368g0430 Nicotiana tabacum
Nitab4.5_0002715g0120 Nicotiana tabacum
Nn6g32078 Nelumbo nucifera
Oeu020899.1 Olea europaea
Oeu035482.1 Olea europaea
Os03g0240900 Oryza sativa ssp. japonica
Os12g0586400 Oryza sativa ssp. japonica
Peaxi162Scf00073g00015 Petunia axillaris
Peaxi162Scf00073g00115 Petunia axillaris
PGR119G0642 Punica granatum
PGSC0003DMG400024733 Solanum tuberosum
Phvul.002G021300 Phaseolus vulgaris
Potri.001G361900 Populus trichocarpa
Pp3c2_14950 Physcomitrium patens
Prupe.7G138000 Prunus persica
Psat1g136760 Pisum sativum
Psat2g165040 Pisum sativum
Psat4g201960 Pisum sativum
Psat5g241560 Pisum sativum
PSO541G0461 Papaver somniferum
PSO675G7200 Papaver somniferum
QL06p042750 Quercus lobata
RcHm_v2.0_Chr2g0104711 Rosa chinensis
Rhsim01G0119100 Rhododendron simsii
Sc16g0001610 Simmondsia chinensis
Sed0018600 Sechium edule
SEGI_06310 Sequoiadendron giganteum
SEGI_18564 Sequoiadendron giganteum
SGA_v2.0_scaffold36G14364 Striga asiatica
SHI23011 Sapria himalayana
SHI23015 Sapria himalayana
SMO358G0218 Selaginella moellendorffii
Solyc01g100190.4 Solanum lycopersicum
Sopen01g043680 Solanum pennellii
Sopen01g043710 Solanum pennellii
Sp7g34600 Schrenkiella parvula
TAR376G0305 Trochodendron aralioides
TAR376G0458 Trochodendron aralioides
TAR628G0695 Trochodendron aralioides
TAR633G2473 Trochodendron aralioides
THA.LOC104807572 Tarenaya hassleriana
Thecc.01G050800 Theobroma cacao
Thhalv10024834m.g Eutrema salsugineum
TPR.G11337 Trifolium pratense
TWI09G0520 Tripterygium wilfordii
unitig_26.g9472 Utricularia gibba
unitig_26.g9473 Utricularia gibba
vmacro21371 Vaccinium macrocarpon
VMungo1215G1500 Vigna mungo
Zm00001eb030410 Zea mays

User provided reference genes

Program Settings