Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p05630 Brassica napus
Aa31LG4G18070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3922 Anthoceros agrestis
Actinidia09420 Actinidia chinensis
Actinidia20374 Actinidia chinensis
Ah.12g056490 Amaranthus hybridus
AL6G31050 Arabidopsis lyrata
Aqoxy7G01651 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HQIA7A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VN1956 Arachis hypogaea
AT5G19540 Arabidopsis thaliana
ATR0315G003 Amborella trichopoda
Atru.chr7.1357 Acer truncatum
AUR62010987 Chenopodium quinoa
AUR62021496 Chenopodium quinoa
AUR62021498 Chenopodium quinoa
BcaB05g23389 Brassica carinata
BcaC03g13685 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p02320 Brassica napus
BolC2t06964H Brassica oleracea
BraA02t05515Z Brassica rapa
CAN.G1529.9 Capsicum annuum
CARHR193360 Cardamine hirsuta
Carub.0006s1789 Capsella rubella
Ca_03976_v3 Cicer arietinum L.
CBR_g3024 Chara braunii
Cc06_g09710 Coffea canephora
CDE02G3701 Ceratophyllum demersum
Cfa021563 Carpinus fangiana
Ciclev10010350m.g Citrus clementina
CiPaw.04G163600 Carya illinoinensis
ClCG00G004520 Citrullus lanatus
COL.COLO4_34874 Corchorus olitorius
Cpa.g.sc23.102 Carica papaya
CsaV3_1G024240 Cucumis sativus L.
CSS0001162 Camellia sinensis var. sinensis
CSS0008633 Camellia sinensis var. sinensis
CSS0008802 Camellia sinensis var. sinensis
CSS0009071 Camellia sinensis var. sinensis
CSS0011769 Camellia sinensis var. sinensis
CSS0021555 Camellia sinensis var. sinensis
DCAR_010452 Daucus carota
Dinv06981 Davidia involucrata
Dinv36636 Davidia involucrata
Dinv41607 Davidia involucrata
Duzib150G0071 Durio zibethinus
Duzib168G0181 Durio zibethinus
ECA233G4048 Erigeron canadensis
EL10Ac8g18489 Beta vulgaris
Eucgr.C01037 Eucalyptus grandis
FAN19G0123 Fragaria x ananassa
FAN19G0378 Fragaria x ananassa
FAN23G0305 Fragaria x ananassa
FAN26G0240 Fragaria x ananassa
FAN28G0185 Fragaria x ananassa
FAN28G1005 Fragaria x ananassa
FvH4_1g04720 Fragaria vesca
FvH4_1g04721 Fragaria vesca
Glyma.07G085900 Glycine max
Glyma.09G191000 Glycine max
Gohir.A07G006100 Gossypium hirsutum
Gohir.D07G005900 Gossypium hirsutum
Gorai.001G005500 Gossypium raimondii
GSVIVG01015386001 Vitis vinifera
HanXRQChr06g0179971 Helianthus annuus
Haze_25723 Corylus avellana
Haze_25730 Corylus avellana
Hma1.2p1_0518F.1_g171060 Hydrangea macrophylla
Hma1.2p1_0518F.1_g171070 Hydrangea macrophylla
HPP92_019989 Vanilla planifolia
Hund26198 Selenicereus undatus
Lalb_Chr14g0371531 Lupinus albus
Lalb_Chr22g0352791 Lupinus albus
Lj2g0015861 Lotus japonicus
Lj7C651T8 Lonicera japonica
Lsat_1_v5_gn_5_96001 Lactuca sativa
Lsat_1_v5_gn_8_95001 Lactuca sativa
Manes.03G021300 Manihot esculenta
Mapoly0115s0052 Marchantia polymorpha
MBI04_g22012_MAGBIO Magnolia biondii
MCO02G293 Micromonas commoda
MD02G1046200 Malus domestica
MD15G1184300 Malus domestica
Medtr6g088460 Medicago truncatula
MELO3C025346.2 Cucumis melo
Migut.K00455 Erythranthe guttata
MSTRG.26421 Avicennia marina
Nitab4.5_0002904g0080 Nicotiana tabacum
Nitab4.5_0005947g0010 Nicotiana tabacum
Nn2g11732 Nelumbo nucifera
Nn8g39172 Nelumbo nucifera
Oeu048670.1 Olea europaea
Os08g0387500 Oryza sativa ssp. japonica
Peaxi162Scf00546g00024 Petunia axillaris
PGR142G0895 Punica granatum
PGSC0003DMG400000312 Solanum tuberosum
Phvul.004G163700 Phaseolus vulgaris
Potri.018G080900 Populus trichocarpa
Pp3c17_15530 Physcomitrium patens
Pp3c17_15540 Physcomitrium patens
PRCOL_00004973 Prasinoderma coloniale
Prupe.7G231800 Prunus persica
Psat1g042920 Pisum sativum
PSO782G1908 Papaver somniferum
PSO832G1226 Papaver somniferum
QL02p085206 Quercus lobata
RcHm_v2.0_Chr2g0090321 Rosa chinensis
RcHm_v2.0_Chr2g0090331 Rosa chinensis
Rhsim01G0095300 Rhododendron simsii
Rhsim01G0096400 Rhododendron simsii
Sabra18G0068100 Salix brachista
SalBow1G1492 Salvia bowleyana
SalBow1G2309 Salvia bowleyana
SalBow1G6148 Salvia bowleyana
SalBow2G1292 Salvia bowleyana
Sc18g0001240 Simmondsia chinensis
Sed0013441 Sechium edule
SEGI_11261 Sequoiadendron giganteum
SEGI_13755 Sequoiadendron giganteum
SEGI_23308 Sequoiadendron giganteum
SEGI_25977 Sequoiadendron giganteum
SEGI_35049 Sequoiadendron giganteum
SGA_v2.0_scaffold307G48040 Striga asiatica
SMO367G0640 Selaginella moellendorffii
Solyc12g007090.2 Solanum lycopersicum
Sopen12g003070 Solanum pennellii
Sp6g24840 Schrenkiella parvula
TAR383G0243 Trochodendron aralioides
THA.LOC104811114 Tarenaya hassleriana
Thecc.09G109700 Theobroma cacao
Thhalv10013469m.g Eutrema salsugineum
TPR.G18453 Trifolium pratense
TPR.G36012 Trifolium pratense
TWI63G0439 Tripterygium wilfordii
unitig_899.g15439 Utricularia gibba
vmacro20704 Vaccinium macrocarpon
VMungo0464G1126 Vigna mungo
Zm00001eb042080 Zea mays

User provided reference genes

Program Settings