Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p30600 Brassica napus
A07p37930 Brassica napus
Aa31LG4G8860 Aethionema arabicum
Actinidia17758 Actinidia chinensis
Ah.05g168360 Amaranthus hybridus
AL2G31350 Arabidopsis lyrata
Aqoxy6G00453 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea
AT1G71780 Arabidopsis thaliana
Atru.chr13.1972 Acer truncatum
AUR62026611 Chenopodium quinoa
AUR62034923 Chenopodium quinoa
BcaB03g15617 Brassica carinata
BcaC08g45757 Brassica carinata
BcaC08g46604 Brassica carinata
BcaC08g46607 Brassica carinata
BolC6t38643H Brassica oleracea
BolC6t39636H Brassica oleracea
BraA07t30695Z Brassica rapa
BraA07t31358Z Brassica rapa
C06p35380 Brassica napus
C06p45840 Brassica napus
CANSAT25G2335 Cannabis sativa
CARHR291000 Cardamine hirsuta
Carub.0002s1854 Capsella rubella
Ca_04656_v3 Cicer arietinum L.
Ca_10645_v3 Cicer arietinum L.
Cc10_g06390 Coffea canephora
CDE05G2658 Ceratophyllum demersum
Cfa018258 Carpinus fangiana
Ciclev10002600m.g Citrus clementina
CiPaw.16G007100 Carya illinoinensis
ClCG08G007180 Citrullus lanatus
COL.COLO4_13722 Corchorus olitorius
Cpa.g.sc26.124 Carica papaya
CsaV3_6G004850 Cucumis sativus L.
CSS0010673 Camellia sinensis var. sinensis
CSS0016395 Camellia sinensis var. sinensis
CSS0045165 Camellia sinensis var. sinensis
DCAR_009611 Daucus carota
DCAR_019968 Daucus carota
Dinv41020 Davidia involucrata
Duzib116G0276 Durio zibethinus
ECA232G2646 Erigeron canadensis
EL10Ac1g01633 Beta vulgaris
Eucgr.F04165 Eucalyptus grandis
FAN15G0123 Fragaria x ananassa
FAN24G1753 Fragaria x ananassa
FAN27G1145 Fragaria x ananassa
FvH4_2g12791 Fragaria vesca
Glyma.16G160100 Glycine max
Gohir.A05G247100 Gossypium hirsutum
Gohir.D05G248600 Gossypium hirsutum
Gorai.009G259700 Gossypium raimondii
GSVIVG01013678001 Vitis vinifera
HanXRQChr11g0320551 Helianthus annuus
Haze_17833 Corylus avellana
Haze_17839 Corylus avellana
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla
HPP92_007671 Vanilla planifolia
Hund17502 Selenicereus undatus
Lalb_Chr06g0161821 Lupinus albus
Lj2g0006240 Lotus japonicus
Lj4A705G47 Lonicera japonica
Lj5g0027482 Lotus japonicus
Lj7A386T90 Lonicera japonica
Lsat_1_v5_gn_9_42581 Lactuca sativa
Manes.02G185600 Manihot esculenta
Mapoly0005s0207 Marchantia polymorpha
MD05G1036200 Malus domestica
MD10G1038300 Malus domestica
Medtr1g097400 Medicago truncatula
Medtr6g034680 Medicago truncatula
MELO3C019959.2 Cucumis melo
Migut.N02941 Erythranthe guttata
MSTRG.22116 Avicennia marina
Nitab4.5_0000433g0010 Nicotiana tabacum
Nitab4.5_0001000g0150 Nicotiana tabacum
Nitab4.5_0002585g0010 Nicotiana tabacum
Nitab4.5_0004541g0020 Nicotiana tabacum
Nn1g05159 Nelumbo nucifera
Nn5g28876 Nelumbo nucifera
Oeu022061.1 Olea europaea
Oeu022062.1 Olea europaea
Os01g0184700 Oryza sativa ssp. japonica
Os01g0715800 Oryza sativa ssp. japonica
Peaxi162Scf00160g01739 Petunia axillaris
Peaxi162Scf00226g00217 Petunia axillaris
PGR102G0915 Punica granatum
PGSC0003DMG400016956 Solanum tuberosum
PGSC0003DMG400031139 Solanum tuberosum
Phvul.004G088200 Phaseolus vulgaris
Potri.002G062300 Populus trichocarpa
Pp3c17_20130 Physcomitrium patens
Pp3c1_40160 Physcomitrium patens
Prupe.8G044500 Prunus persica
Psat0s2687g0120 Pisum sativum
Psat6g189440 Pisum sativum
PSO541G4578 Papaver somniferum
PSO675G1818 Papaver somniferum
QL02p036789 Quercus lobata
QL02p036792 Quercus lobata
RcHm_v2.0_Chr6g0273681 Rosa chinensis
Rhsim06G0093300 Rhododendron simsii
Sabra02G0050300 Salix brachista
Sabra05G0151400 Salix brachista
SalBow6G1236 Salvia bowleyana
Sc20g0003140 Simmondsia chinensis
Sed0022332 Sechium edule
SEGI_03773 Sequoiadendron giganteum
SEGI_04047 Sequoiadendron giganteum
SEGI_08036 Sequoiadendron giganteum
SEGI_37275 Sequoiadendron giganteum
SGA_v2.0_scaffold130G34341 Striga asiatica
SGA_v2.0_scaffold166G38393 Striga asiatica
SGA_v2.0_scaffold16G07845 Striga asiatica
SGA_v2.0_scaffold43G16323 Striga asiatica
Solyc04g072120.2 Solanum lycopersicum
Solyc12g056760.2 Solanum lycopersicum
Sopen04g028290 Solanum pennellii
Sopen12g029440 Solanum pennellii
Sp5g26800 Schrenkiella parvula
SpUn0095_0030 Schrenkiella parvula
TAR381G0628 Trochodendron aralioides
TAR625G0687 Trochodendron aralioides
THA.LOC104800097 Tarenaya hassleriana
Thecc.08G164300 Theobroma cacao
Thhalv10019179m.g Eutrema salsugineum
TPR.G17022 Trifolium pratense
TPR.G22092 Trifolium pratense
TWI53G2072 Tripterygium wilfordii
unitig_578.g16221 Utricularia gibba
vmacro21199 Vaccinium macrocarpon
VMungo0464G0571 Vigna mungo
VMungo1127G1001 Vigna mungo
VMungo1309G1728 Vigna mungo
Zm00001eb121890 Zea mays

User provided reference genes

Program Settings