Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p32790 Brassica napus
Aa31LG1G21960 Aethionema arabicum
Actinidia19704 Actinidia chinensis
Ah.01g009250 Amaranthus hybridus
AL6G12370 Arabidopsis lyrata
Aqoxy4G03224 Aquilegia oxysepala
AT5G03080 Arabidopsis thaliana
ATR0314G039 Amborella trichopoda
Atru.chr5.2634 Acer truncatum
AUR62040036 Chenopodium quinoa
AUR62042543 Chenopodium quinoa
BcaB05g21852 Brassica carinata
BcaC03g13032 Brassica carinata
BcaC06g32035 Brassica carinata
BcaNung06917 Brassica carinata
BolC2t06076H Brassica oleracea
BolC9t60096H Brassica oleracea
BolC9t60101H Brassica oleracea
BraA02t04743Z Brassica rapa
BraA10t45313Z Brassica rapa
C02p00780 Brassica napus
C09p73660 Brassica napus
CAN.G1676.11 Capsicum annuum
CANSAT80G0049 Cannabis sativa
CARHR210250 Cardamine hirsuta
Carub.0006s0187 Capsella rubella
Ca_11456_v3 Cicer arietinum L.
Cc06_g03660 Coffea canephora
Cfa017517 Carpinus fangiana
Cfa017518 Carpinus fangiana
Ciclev10012685m.g Citrus clementina
CiPaw.09G179200 Carya illinoinensis
CiPaw.10G136900 Carya illinoinensis
ClCG02G023990 Citrullus lanatus
COL.COLO4_27064 Corchorus olitorius
COL.COLO4_27065 Corchorus olitorius
Cpa.g.c48297 Carica papaya
Cpa.g.sc174.15 Carica papaya
Cre06.g272400 Chlamydomonas reinhardtii
CsaV3_4G023360 Cucumis sativus L.
CSS0011727 Camellia sinensis var. sinensis
CSS0028203 Camellia sinensis var. sinensis
DCAR_009281 Daucus carota
Dinv35725 Davidia involucrata
Dinv37264 Davidia involucrata
Duzib128G1803 Durio zibethinus
ECA233G4004 Erigeron canadensis
EL10Ac7g16508 Beta vulgaris
Eucgr.K03216 Eucalyptus grandis
FAN02G2564 Fragaria x ananassa
FAN05G5506 Fragaria x ananassa
FAN09G2765 Fragaria x ananassa
FAN14G1906 Fragaria x ananassa
FvH4_6g15490 Fragaria vesca
Glyma.10G050300 Glycine max
Glyma.13G137800 Glycine max
Gohir.A04G076100 Gossypium hirsutum
Gohir.A13G082150 Gossypium hirsutum
Gohir.D04G115201 Gossypium hirsutum
Gohir.D13G095800 Gossypium hirsutum
Gorai.001G248000 Gossypium raimondii
Gorai.009G419800 Gossypium raimondii
HanXRQChr11g0350001 Helianthus annuus
HanXRQChr13g0399561 Helianthus annuus
HanXRQChr13g0399571 Helianthus annuus
Haze_20632 Corylus avellana
Hma1.2p1_0111F.1_g053980 Hydrangea macrophylla
Hma1.2p1_0350F.1_g132800 Hydrangea macrophylla
HPP92_012051 Vanilla planifolia
Lalb_Chr06g0171481 Lupinus albus
Lalb_Chr21g0314711 Lupinus albus
Lj3P980T19 Lonicera japonica
Lj5g0010386 Lotus japonicus
Lsat_1_v5_gn_1_54060 Lactuca sativa
Lsat_1_v5_gn_6_30080 Lactuca sativa
Manes.08G004100 Manihot esculenta
Manes.08G004101 Manihot esculenta
Manes.08G004113 Manihot esculenta
Manes.08G004123 Manihot esculenta
Manes.08G004124 Manihot esculenta
Manes.08G004129 Manihot esculenta
Mapoly0060s0060 Marchantia polymorpha
MBI15_g16380_MAGBIO Magnolia biondii
MCO09G464 Micromonas commoda
MD04G1102900 Malus domestica
MD04G1105500 Malus domestica
MD12G1123000 Malus domestica
Medtr1g066770 Medicago truncatula
MELO3C014679.2 Cucumis melo
Migut.L01666 Erythranthe guttata
MSTRG.10302 Avicennia marina
MSTRG.19142 Avicennia marina
Nitab4.5_0000669g0160 Nicotiana tabacum
Nitab4.5_0007806g0040 Nicotiana tabacum
Nn2g10693 Nelumbo nucifera
Nn2g10694 Nelumbo nucifera
Oeu029419.1 Olea europaea
Oeu060090.1 Olea europaea
Os03g0288700 Oryza sativa ssp. japonica
Peaxi162Scf00005g04018 Petunia axillaris
PGR004G0770 Punica granatum
PGR142G2113 Punica granatum
Phvul.007G164600 Phaseolus vulgaris
Potri.006G130700 Populus trichocarpa
Potri.016G086700 Populus trichocarpa
Pp3c16_13170 Physcomitrium patens
Pp3c5_750 Physcomitrium patens
Prupe.6G240200 Prunus persica
Psat6g070280 Pisum sativum
PSO063G7551 Papaver somniferum
PSO339G3338 Papaver somniferum
QL07p045114 Quercus lobata
RcHm_v2.0_Chr3g0468971 Rosa chinensis
Rhsim04G0149700 Rhododendron simsii
Sabra06G0102700 Salix brachista
Sabra16G0093000 Salix brachista
SalBow3G3282 Salvia bowleyana
SalBow3G3389 Salvia bowleyana
Sc02g0001930 Simmondsia chinensis
Sed0011219 Sechium edule
Sed0012482 Sechium edule
SEGI_14044 Sequoiadendron giganteum
SGA_v2.0_scaffold94G28671 Striga asiatica
SHI12539 Sapria himalayana
SMO367G0756 Selaginella moellendorffii
Solyc09g007450.3 Solanum lycopersicum
Sopen09g002330 Solanum pennellii
Sp6g39610 Schrenkiella parvula
TAR369G0130 Trochodendron aralioides
TAR623G0063 Trochodendron aralioides
THA.LOC104816326 Tarenaya hassleriana
THA.LOC104823241 Tarenaya hassleriana
Thecc.05G055500 Theobroma cacao
Thhalv10014320m.g Eutrema salsugineum
TPR.G30255 Trifolium pratense
unitig_26.g9217 Utricularia gibba
VMungo0720G1693 Vigna mungo
VMungo1309G1614 Vigna mungo
Zm00001eb013250 Zea mays

User provided reference genes

Program Settings