Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p11950 Brassica napus
Aa31LG10G11810 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2742 Anthoceros agrestis
Actinidia14228 Actinidia chinensis
Actinidia26358 Actinidia chinensis
Actinidia38706 Actinidia chinensis
Ah.09g224130 Amaranthus hybridus
Aqoxy7G03592 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9T6TW9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H1LUDS Arachis hypogaea
AT5G35080 Arabidopsis thaliana
ATR0767G116 Amborella trichopoda
Atru.chr7.2014 Acer truncatum
AUR62011221 Chenopodium quinoa
AUR62020012 Chenopodium quinoa
BcaB01g03929 Brassica carinata
BcaB02g10581 Brassica carinata
BcaC01g05834 Brassica carinata
BcaC02g11442 Brassica carinata
BolC3t14579H Brassica oleracea
BolC4t23121H Brassica oleracea
BraA05t20138Z Brassica rapa
C03p21960 Brassica napus
C04p15500 Brassica napus
CAN.G1281.6 Capsicum annuum
CANSAT11G2438 Cannabis sativa
CARHR217140 Cardamine hirsuta
CARHR217150 Cardamine hirsuta
Carub.0007s3085 Capsella rubella
Ca_03100_v3 Cicer arietinum L.
Ca_27153_v3 Cicer arietinum L.
CBR_g45403 Chara braunii
Cc06_g07640 Coffea canephora
CDE02G2611 Ceratophyllum demersum
Cfa002261 Carpinus fangiana
Cfa024351 Carpinus fangiana
Ciclev10009016m.g Citrus clementina
CiPaw.04G177400 Carya illinoinensis
ClCG06G011880 Citrullus lanatus
COL.COLO4_33365 Corchorus olitorius
Cpa.g.sc46.69 Carica papaya
Cre06.g257900 Chlamydomonas reinhardtii
CsaV3_1G028340 Cucumis sativus L.
CSS0024399 Camellia sinensis var. sinensis
DCAR_009345 Daucus carota
Dinv36447 Davidia involucrata
Dinv41444 Davidia involucrata
Duzib168G0734 Durio zibethinus
Duzib187G1717 Durio zibethinus
ECA240G1064 Erigeron canadensis
EL10Ac8g18781 Beta vulgaris
Eucgr.C00480 Eucalyptus grandis
FAN19G0623 Fragaria x ananassa
FAN26G0160 Fragaria x ananassa
FAN28G0031 Fragaria x ananassa
FvH4_1g02000 Fragaria vesca
FvH4_1g02060 Fragaria vesca
Glyma.09G091600 Glycine max
Glyma.15G198100 Glycine max
Gohir.A08G090600 Gossypium hirsutum
Gohir.A13G202000 Gossypium hirsutum
Gohir.D08G101500 Gossypium hirsutum
Gohir.D13G207800 Gossypium hirsutum
Gohir.D13G208000 Gossypium hirsutum
Gorai.004G109500 Gossypium raimondii
Gorai.013G236700 Gossypium raimondii
GSVIVG01012859001 Vitis vinifera
HanXRQChr03g0063361 Helianthus annuus
HanXRQChr03g0068961 Helianthus annuus
HanXRQChr04g0099921 Helianthus annuus
HanXRQChr09g0241861 Helianthus annuus
Haze_25444 Corylus avellana
HPP92_020539 Vanilla planifolia
Hund09308 Selenicereus undatus
Lalb_Chr08g0233581 Lupinus albus
Lalb_Chr11g0073101 Lupinus albus
Lj6g0025347 Lotus japonicus
Lj7A439T20 Lonicera japonica
Lsat_1_v5_gn_7_46800 Lactuca sativa
Manes.14G119600 Manihot esculenta
Mapoly0020s0022 Marchantia polymorpha
MBI15_g25760_MAGBIO Magnolia biondii
MCO11G854 Micromonas commoda
MD02G1018200 Malus domestica
MD15G1162200 Malus domestica
Medtr2g450740 Medicago truncatula
MELO3C010277.2 Cucumis melo
Migut.J01236 Erythranthe guttata
MSTRG.6077 Avicennia marina
Nitab4.5_0002286g0050 Nicotiana tabacum
Nitab4.5_0002845g0020 Nicotiana tabacum
Nn8g39653 Nelumbo nucifera
Oeu012222.1 Olea europaea
Oeu028018.1 Olea europaea
Oeu028135.2 Olea europaea
Os06g0644800 Oryza sativa ssp. japonica
Peaxi162Scf00088g00520 Petunia axillaris
PGR142G4414 Punica granatum
PGSC0003DMG400030689 Solanum tuberosum
Phvul.009G212200 Phaseolus vulgaris
Potri.006G061600 Populus trichocarpa
Potri.018G118200 Populus trichocarpa
Pp3c1_27810 Physcomitrium patens
Pp3c2_6810 Physcomitrium patens
PRCOL_00001292 Prasinoderma coloniale
Prupe.7G257600 Prunus persica
Psat1g021320 Pisum sativum
PSO017G3833 Papaver somniferum
PSO478G5201 Papaver somniferum
QL02p090804 Quercus lobata
RcHm_v2.0_Chr1g0314561 Rosa chinensis
RcHm_v2.0_Chr2g0087061 Rosa chinensis
RcHm_v2.0_Chr5g0069501 Rosa chinensis
RcHm_v2.0_Chr7g0241391 Rosa chinensis
Rhsim03G0253300 Rhododendron simsii
Sabra06G0044200 Salix brachista
Sc08g0006020 Simmondsia chinensis
Sed0001591 Sechium edule
Sed0021107 Sechium edule
SEGI_36543 Sequoiadendron giganteum
SGA_v2.0_scaffold45G17077 Striga asiatica
SMO174G0227 Selaginella moellendorffii
Solyc07g007380.4 Solanum lycopersicum
Sopen07g003450 Solanum pennellii
Sp4g15930 Schrenkiella parvula
TAR100G0002 Trochodendron aralioides
TAR170G0003 Trochodendron aralioides
THA.LOC104808948 Tarenaya hassleriana
THA.LOC104815290 Tarenaya hassleriana
Thecc.09G137600 Theobroma cacao
Thhalv10002066m.g Eutrema salsugineum
TWI32G1342 Tripterygium wilfordii
TWI63G0008 Tripterygium wilfordii
TWI63G1467 Tripterygium wilfordii
unitig_0.g507 Utricularia gibba
vmacro06115 Vaccinium macrocarpon
VMungo1309G2820 Vigna mungo
Zm00001eb028460 Zea mays
Zm00001eb136970 Zea mays

User provided reference genes

Program Settings