Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p30090 Brassica napus
Aa31LG2G9400 Aethionema arabicum
Actinidia05595 Actinidia chinensis
Ah.09g235910 Amaranthus hybridus
Ah.14g089090 Amaranthus hybridus
AL2G15140 Arabidopsis lyrata
Aqoxy1G02654 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.RD8W4Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S4RYHR Arachis hypogaea
AT1G61215 Arabidopsis thaliana
ATR0693G270 Amborella trichopoda
Atru.chr10.1974 Acer truncatum
AUR62014750 Chenopodium quinoa
AUR62016928 Chenopodium quinoa
BcaC02g10581 Brassica carinata
BolC1t03777H Brassica oleracea
BolC4t24255H Brassica oleracea
BraA01t03140Z Brassica rapa
C01p38150 Brassica napus
C04p27230 Brassica napus
CAN.G132.1 Capsicum annuum
CAN.G1705.6 Capsicum annuum
CANSAT56G3709 Cannabis sativa
CARHR051450 Cardamine hirsuta
Carub.0002s0394 Capsella rubella
Ca_00293_v3 Cicer arietinum L.
Ca_10477_v3 Cicer arietinum L.
Ca_18508_v3 Cicer arietinum L.
Cc02_g12700 Coffea canephora
Ciclev10015122m.g Citrus clementina
CiPaw.09G160500 Carya illinoinensis
ClCG03G005620 Citrullus lanatus
COL.COLO4_31546 Corchorus olitorius
Cpa.g.sc27.97 Carica papaya
CsaV3_1G011880 Cucumis sativus L.
DCAR_004127 Daucus carota
Dinv39789 Davidia involucrata
Dinv40515 Davidia involucrata
Duzib192G0007 Durio zibethinus
Duzib235G1122 Durio zibethinus
ECA248G1697 Erigeron canadensis
EL10Ac8g20638 Beta vulgaris
Eucgr.E03368 Eucalyptus grandis
Eucgr.L01442 Eucalyptus grandis
FAN11G2163 Fragaria x ananassa
FAN16G2770 Fragaria x ananassa
FAN21G1296 Fragaria x ananassa
FAN25G0688 Fragaria x ananassa
FvH4_3g04470 Fragaria vesca
Glyma.07G192000 Glycine max
Glyma.13G184500 Glycine max
Glyma.13G244400 Glycine max
Glyma.15G069300 Glycine max
Gohir.A05G163500 Gossypium hirsutum
Gohir.A06G124200 Gossypium hirsutum
Gohir.A10G022400 Gossypium hirsutum
Gohir.D05G166500 Gossypium hirsutum
Gohir.D06G129100 Gossypium hirsutum
Gohir.D10G023200 Gossypium hirsutum
Gorai.009G171600 Gossypium raimondii
Gorai.010G150700 Gossypium raimondii
Gorai.011G024300 Gossypium raimondii
Haze_06545 Corylus avellana
Hma1.2p1_0835F.1_g225820 Hydrangea macrophylla
HPP92_014059 Vanilla planifolia
Hund23642 Selenicereus undatus
Lalb_Chr05g0218271 Lupinus albus
Lalb_Chr09g0327441 Lupinus albus
Lalb_Chr09g0327451 Lupinus albus
Lalb_Chr15g0089971 Lupinus albus
Lalb_Chr20g0122161 Lupinus albus
Lj1C1211T3 Lonicera japonica
Lj6g0013063 Lotus japonicus
Lsat_1_v5_gn_1_41861 Lactuca sativa
Manes.17G040900 Manihot esculenta
MBI02_g29386_MAGBIO Magnolia biondii
MD05G1322900 Malus domestica
Medtr2g012600 Medicago truncatula
Medtr2g451410 Medicago truncatula
Medtr4g090460 Medicago truncatula
MELO3C002565.2 Cucumis melo
Migut.H01498 Erythranthe guttata
MSTRG.7324 Avicennia marina
Nitab4.5_0001820g0010 Nicotiana tabacum
Nitab4.5_0003114g0010 Nicotiana tabacum
Nitab4.5_0003341g0040 Nicotiana tabacum
Nitab4.5_0007442g0010 Nicotiana tabacum
Nn1g03952 Nelumbo nucifera
Nn1g06691 Nelumbo nucifera
Oeu031647.1 Olea europaea
Os07g0565300 Oryza sativa ssp. japonica
Peaxi162Scf00031g00085 Petunia axillaris
Peaxi162Scf00612g00210 Petunia axillaris
PGR042G3859 Punica granatum
PGSC0003DMG400010827 Solanum tuberosum
PGSC0003DMG400022422 Solanum tuberosum
Phvul.002G224000 Phaseolus vulgaris
Phvul.006G190000 Phaseolus vulgaris
Potri.004G036900 Populus trichocarpa
Pp3c17_1160 Physcomitrium patens
Pp3c17_1175 Physcomitrium patens
Prupe.4G039700 Prunus persica
Psat1g207320 Pisum sativum
Psat7g111000 Pisum sativum
PSO541G6465 Papaver somniferum
PSO675G3742 Papaver somniferum
QL05p038046 Quercus lobata
RcHm_v2.0_Chr5g0006871 Rosa chinensis
Sabra04G0022400 Salix brachista
SalBow7G0109 Salvia bowleyana
SalBow8G0622 Salvia bowleyana
SalBow8G3435 Salvia bowleyana
Sc17g0006450 Simmondsia chinensis
Sed0010049 Sechium edule
Sed0025637 Sechium edule
SEGI_30566 Sequoiadendron giganteum
SMO364G0914 Selaginella moellendorffii
Solyc02g078810.4 Solanum lycopersicum
Solyc10g009160.3 Solanum lycopersicum
Sopen02g023630 Solanum pennellii
Sopen10g004940 Solanum pennellii
Sp2g03260 Schrenkiella parvula
TAR627G0703 Trochodendron aralioides
TAR629G0703 Trochodendron aralioides
THA.LOC104819085 Tarenaya hassleriana
Thecc.06G195300 Theobroma cacao
Thhalv10023448m.g Eutrema salsugineum
TPR.G26554 Trifolium pratense
TPR.G36743 Trifolium pratense
TWI38G1456 Tripterygium wilfordii
TWI38G1829 Tripterygium wilfordii
vmacro22270 Vaccinium macrocarpon
VMungo0251G1815 Vigna mungo
VMungo0540G1002 Vigna mungo
Zm00001eb033860 Zea mays
Zm00001eb107020 Zea mays
Zm00001eb257800 Zea mays
Zm00001eb290840 Zea mays
Zm00001eb324470 Zea mays

User provided reference genes

Program Settings