Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p23470 Brassica napus
A04p02980 Brassica napus
A04p31910 Brassica napus
A07p23640 Brassica napus
A09p50540 Brassica napus
Aa31LG10G12450 Aethionema arabicum
AL4G40250 Arabidopsis lyrata
AL5G39310 Arabidopsis lyrata
Aqoxy2G00114 Aquilegia oxysepala
AT2G41905 Arabidopsis thaliana
AT3G57690 Arabidopsis thaliana
Atru.chr1.1006 Acer truncatum
Atru.chr1.974 Acer truncatum
BcaB01g03426 Brassica carinata
BcaB02g07583 Brassica carinata
BcaB02g08300 Brassica carinata
BcaB02g08302 Brassica carinata
BcaB06g29217 Brassica carinata
BcaC01g05321 Brassica carinata
BcaC02g07275 Brassica carinata
BcaC02g09954 Brassica carinata
BcaC07g40149 Brassica carinata
BcaC07g40352 Brassica carinata
BcaC08g44863 Brassica carinata
BcaNung07196 Brassica carinata
BolC3t15170H Brassica oleracea
BolC4t25028H Brassica oleracea
BolC4t28440H Brassica oleracea
BolC6t37629H Brassica oleracea
BolC8t50929H Brassica oleracea
BraA03t11563Z Brassica rapa
BraA04t16021Z Brassica rapa
BraA04t18649Z Brassica rapa
BraA07t30018Z Brassica rapa
BraA09t40508Z Brassica rapa
C03p27990 Brassica napus
C04p34740 Brassica napus
C04p69380 Brassica napus
C06p24770 Brassica napus
C08p33270 Brassica napus
CANSAT80G2246 Cannabis sativa
CARHR137000 Cardamine hirsuta
CARHR167870 Cardamine hirsuta
Carub.0004s2422 Capsella rubella
Carub.0005s2453 Capsella rubella
Ca_05436_v3 Cicer arietinum L.
Ca_08485_v3 Cicer arietinum L.
Cc02_g27740 Coffea canephora
Cc02_g27760 Coffea canephora
Cfa010746 Carpinus fangiana
CiPaw.09G034400 Carya illinoinensis
CiPaw.13G003600 Carya illinoinensis
ClCG09G004270 Citrullus lanatus
ClCG10G012450 Citrullus lanatus
COL.COLO4_23921 Corchorus olitorius
COL.COLO4_28709 Corchorus olitorius
CsaV3_3G032220 Cucumis sativus L.
CSS0011241 Camellia sinensis var. sinensis
CSS0022323 Camellia sinensis var. sinensis
CSS0022662 Camellia sinensis var. sinensis
CSS0022867 Camellia sinensis var. sinensis
CSS0030443 Camellia sinensis var. sinensis
CSS0036301 Camellia sinensis var. sinensis
CSS0036543 Camellia sinensis var. sinensis
DCAR_029662 Daucus carota
Dinv18091 Davidia involucrata
Duzib093G2098 Durio zibethinus
Duzib106G1083 Durio zibethinus
Duzib114G0144 Durio zibethinus
Duzib128G1940 Durio zibethinus
Duzib268G0790 Durio zibethinus
Eucgr.A02403 Eucalyptus grandis
Eucgr.H02490 Eucalyptus grandis
Glyma.02G180200 Glycine max
Glyma.03G140000 Glycine max
Glyma.06G257800 Glycine max
Glyma.10G094600 Glycine max
Glyma.19G142900 Glycine max
Hma1.2p1_0293F.1_g116270 Hydrangea macrophylla
Hma1.2p1_0312F.1_g121430 Hydrangea macrophylla
Hma1.2p1_0621F.1_g190610 Hydrangea macrophylla
Hma1.2p1_0728F.1_g209250 Hydrangea macrophylla
Hma1.2p1_1995F.1_g310340 Hydrangea macrophylla
Lalb_Chr01g0008081 Lupinus albus
Lalb_Chr01g0008091 Lupinus albus
Lalb_Chr01g0015271 Lupinus albus
Lalb_Chr01g0017541 Lupinus albus
Lalb_Chr03g0033981 Lupinus albus
Lalb_Chr03g0033991 Lupinus albus
Lalb_Chr12g0205751 Lupinus albus
Lalb_Chr19g0132101 Lupinus albus
Lalb_Chr20g0110921 Lupinus albus
Lalb_Chr21g0316371 Lupinus albus
Lalb_Chr25g0287471 Lupinus albus
Lj1g0001667 Lotus japonicus
Lj1g0006897 Lotus japonicus
Lj5g0004873 Lotus japonicus
Manes.07G004601 Manihot esculenta
Manes.08G047900 Manihot esculenta
Manes.09G029800 Manihot esculenta
Manes.10G145300 Manihot esculenta
MBI01_g27620_MAGBIO Magnolia biondii
MBI04_g13622_MAGBIO Magnolia biondii
MD02G1314100 Malus domestica
Medtr1g052120 Medicago truncatula
Medtr7g092350 Medicago truncatula
Migut.B01321 Erythranthe guttata
Nn2g15425 Nelumbo nucifera
Nn7g36174 Nelumbo nucifera
Phvul.001G137100 Phaseolus vulgaris
Phvul.007G255800 Phaseolus vulgaris
Phvul.011G150500 Phaseolus vulgaris
Phvul.011G150600 Phaseolus vulgaris
Potri.001G268800 Populus trichocarpa
Potri.006G056200 Populus trichocarpa
Potri.009G063600 Populus trichocarpa
Potri.016G052001 Populus trichocarpa
Prupe.2G010700 Prunus persica
PSO384G3061 Papaver somniferum
QL04p005498 Quercus lobata
RcHm_v2.0_Chr1g0315711 Rosa chinensis
Rhsim03G0011800 Rhododendron simsii
Sabra16G0164700 Salix brachista
Sed0003541 Sechium edule
Sed0003950 Sechium edule
Sed0007200 Sechium edule
Sed0014034 Sechium edule
Sed0016248 Sechium edule
Sed0021947 Sechium edule
Sed0023384 Sechium edule
SHI24452 Sapria himalayana
Sp4g24180 Schrenkiella parvula
Sp5g04940 Schrenkiella parvula
Thecc.01G412500 Theobroma cacao
Thecc.05G164300 Theobroma cacao
TPR.G3828 Trifolium pratense
TWI09G0988 Tripterygium wilfordii
TWI73G1008 Tripterygium wilfordii
vmacro13654 Vaccinium macrocarpon

User provided reference genes

Program Settings