Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p03510 Brassica napus
A08p03510 Brassica napus
Actinidia27983 Actinidia chinensis
Actinidia34369 Actinidia chinensis
AL1G57420 Arabidopsis lyrata
AL1G58430 Arabidopsis lyrata
Aqoxy6G02716 Aquilegia oxysepala
Aqoxy6G02727 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DF92AY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZQ2RMB Arachis hypogaea
AT1G49880 Arabidopsis thaliana
ATR0165G041 Amborella trichopoda
Atru.chr5.2403 Acer truncatum
AUR62022505 Chenopodium quinoa
BcaB04g17288 Brassica carinata
BolC3t21249H Brassica oleracea
BraA06t23559Z Brassica rapa
BraA08t32384Z Brassica rapa
C03p89340 Brassica napus
CAN.G689.10 Capsicum annuum
CANSAT25G2379 Cannabis sativa
CARHR039940 Cardamine hirsuta
Carub.0001s3909 Capsella rubella
Ca_24141_v3 Cicer arietinum L.
CBR_g2851 Chara braunii
CBR_g31027 Chara braunii
CBR_g38847 Chara braunii
Cc02_g19680 Coffea canephora
CDE04G3180 Ceratophyllum demersum
CDE07G0521 Ceratophyllum demersum
Cfa004647 Carpinus fangiana
Ciclev10029310m.g Citrus clementina
Ciclev10029975m.g Citrus clementina
CiPaw.06G167100 Carya illinoinensis
ClCG10G010520 Citrullus lanatus
COL.COLO4_32538 Corchorus olitorius
Cpa.g.sc106.74 Carica papaya
Cre03.g173200 Chlamydomonas reinhardtii
Cre14.g633000 Chlamydomonas reinhardtii
CsaV3_4G000440 Cucumis sativus L.
CSS0014981 Camellia sinensis var. sinensis
CSS0022898 Camellia sinensis var. sinensis
DCAR_021961 Daucus carota
Dinv15795 Davidia involucrata
Dinv42222 Davidia involucrata
Duzib052G0352 Durio zibethinus
ECA240G0181 Erigeron canadensis
EL10Ac8g19365 Beta vulgaris
Eucgr.G01264 Eucalyptus grandis
FAN15G3606 Fragaria x ananassa
FAN20G2059 Fragaria x ananassa
FAN24G1644 Fragaria x ananassa
FvH4_2g03990 Fragaria vesca
Glyma.13G199600 Glycine max
Glyma.15G237900 Glycine max
Gohir.A04G118800 Gossypium hirsutum
Gohir.D04G160500 Gossypium hirsutum
Gohir.D13G044800 Gossypium hirsutum
Gorai.012G148200 Gossypium raimondii
Gorai.013G049600 Gossypium raimondii
GSVIVG01037859001 Vitis vinifera
HanXRQChr03g0069991 Helianthus annuus
Haze_10245 Corylus avellana
Haze_26784 Corylus avellana
HPP92_023672 Vanilla planifolia
HPP92_023689 Vanilla planifolia
Hund08178 Selenicereus undatus
Hund12620 Selenicereus undatus
Lalb_Chr24g0402091 Lupinus albus
Lj3g0017538 Lotus japonicus
Lj4g0000264 Lotus japonicus
Lj5A217G90 Lonicera japonica
Lsat_1_v5_gn_9_112480 Lactuca sativa
Manes.10G081300 Manihot esculenta
Mapoly0036s0053 Marchantia polymorpha
MCO01G292 Micromonas commoda
MCO01G319 Micromonas commoda
MD05G1097000 Malus domestica
MD10G1103100 Malus domestica
Medtr0857s0010 Medicago truncatula
Medtr1g050465 Medicago truncatula
Medtr8g045467 Medicago truncatula
Medtr8g045480 Medicago truncatula
MELO3C017991.2 Cucumis melo
Migut.B00426 Erythranthe guttata
Migut.B00427 Erythranthe guttata
Migut.B00429 Erythranthe guttata
Migut.F01600 Erythranthe guttata
MSTRG.16689 Avicennia marina
Nitab4.5_0000158g0130 Nicotiana tabacum
Nitab4.5_0008364g0030 Nicotiana tabacum
Nn1g07564 Nelumbo nucifera
Oeu009678.2 Olea europaea
Os03g0206300 Oryza sativa ssp. japonica
Peaxi162Scf00429g00622 Petunia axillaris
PGR042G2710 Punica granatum
PGSC0003DMG400002983 Solanum tuberosum
Phvul.003G276100 Phaseolus vulgaris
Potri.001G296000 Populus trichocarpa
Potri.009G090200 Populus trichocarpa
Pp3c19_18310 Physcomitrium patens
Pp3c2_36820 Physcomitrium patens
Prupe.8G141400 Prunus persica
Psat4g180760 Pisum sativum
Psat6g139520 Pisum sativum
Psat7g087120 Pisum sativum
PSO541G2579 Papaver somniferum
PSO675G3202 Papaver somniferum
QL11p031741 Quercus lobata
RcHm_v2.0_Chr6g0253041 Rosa chinensis
RcHm_v2.0_Chr6g0253051 Rosa chinensis
RcHm_v2.0_Chr6g0253221 Rosa chinensis
Rhsim05G0090000 Rhododendron simsii
Rhsim11G0154200 Rhododendron simsii
RhsimUnG0125400 Rhododendron simsii
Sabra09G0069800 Salix brachista
SalBow6G1186 Salvia bowleyana
SalBow6G6323 Salvia bowleyana
Sc18g0003610 Simmondsia chinensis
Sed0007262 Sechium edule
SEGI_34662 Sequoiadendron giganteum
SGA_v2.0_scaffold225G43026 Striga asiatica
SHI05087 Sapria himalayana
SHI05088 Sapria himalayana
SMO172G0176 Selaginella moellendorffii
Solyc11g071960.2 Solanum lycopersicum
Sopen11g029630 Solanum pennellii
Sp1g36760 Schrenkiella parvula
THA.LOC104825832 Tarenaya hassleriana
Thecc.02G114500 Theobroma cacao
Thhalv10011740m.g Eutrema salsugineum
TPR.G14598 Trifolium pratense
TPR.G17607 Trifolium pratense
TPR.G18583 Trifolium pratense
TWI14G1052 Tripterygium wilfordii
unitig_37.g12800 Utricularia gibba
vmacro01971 Vaccinium macrocarpon
VMungo0251G2197 Vigna mungo
Zm00001eb007440 Zea mays

User provided reference genes

Program Settings