Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p27800 Brassica napus
Aa31LG3G5820 Aethionema arabicum
Actinidia08857 Actinidia chinensis
Actinidia16187 Actinidia chinensis
Actinidia25603 Actinidia chinensis
Actinidia36793 Actinidia chinensis
AL8G24460 Arabidopsis lyrata
Aqoxy4G02270 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.QFFJ7D Arachis hypogaea
AT5G50350 Arabidopsis thaliana
ATR0751G048 Amborella trichopoda
Atru.chr9.1022 Acer truncatum
AUR62025869 Chenopodium quinoa
AUR62029840 Chenopodium quinoa
BcaC01g04812 Brassica carinata
BolC3t15674H Brassica oleracea
BraA03t11991Z Brassica rapa
C03p33530 Brassica napus
CAN.G352.49 Capsicum annuum
CANSAT80G2082 Cannabis sativa
CARHR258130 Cardamine hirsuta
Carub.0008s1043 Capsella rubella
Ca_16087_v3 Cicer arietinum L.
Ca_25438_v3 Cicer arietinum L.
Cc04_g10180 Coffea canephora
CDE03G0480 Ceratophyllum demersum
CDE06G2288 Ceratophyllum demersum
Cfa018874 Carpinus fangiana
Ciclev10019441m.g Citrus clementina
CiPaw.11G011000 Carya illinoinensis
CiPaw.12G036400 Carya illinoinensis
ClCG03G003580 Citrullus lanatus
COL.COLO4_16831 Corchorus olitorius
Cpa.g.sc4.97 Carica papaya
CsaV3_1G009430 Cucumis sativus L.
CSS0031701 Camellia sinensis var. sinensis
CSS0040133 Camellia sinensis var. sinensis
CSS0041106 Camellia sinensis var. sinensis
DCAR_007472 Daucus carota
Dinv04847 Davidia involucrata
Dinv11102 Davidia involucrata
Duzib068G1391 Durio zibethinus
Duzib084G0018 Durio zibethinus
Duzib205G1346 Durio zibethinus
ECA247G0960 Erigeron canadensis
EL10Ac5g11534 Beta vulgaris
EL10As4g23466 Beta vulgaris
Eucgr.K02750 Eucalyptus grandis
FAN04G1413 Fragaria x ananassa
FAN08G0706 Fragaria x ananassa
FAN13G1318 Fragaria x ananassa
FAN25G1054 Fragaria x ananassa
FvH4_5g07650 Fragaria vesca
Glyma.04G193600 Glycine max
Glyma.06G172500 Glycine max
Gohir.A09G245800 Gossypium hirsutum
Gohir.A11G035500 Gossypium hirsutum
Gohir.D09G246400 Gossypium hirsutum
Gohir.D11G039100 Gossypium hirsutum
Gorai.006G270900 Gossypium raimondii
Gorai.007G042000 Gossypium raimondii
GSVIVG01003640001 Vitis vinifera
HanXRQChr02g0035181 Helianthus annuus
HanXRQChr04g0100301 Helianthus annuus
HanXRQChr05g0135831 Helianthus annuus
Haze_07258 Corylus avellana
HPP92_027039 Vanilla planifolia
Hund02416 Selenicereus undatus
Lalb_Chr08g0237001 Lupinus albus
Lalb_Chr11g0069691 Lupinus albus
Lj1g0006481 Lotus japonicus
Lj5C99T12 Lonicera japonica
Lj9A476T55 Lonicera japonica
Lsat_1_v5_gn_1_29580 Lactuca sativa
Lsat_1_v5_gn_2_81680 Lactuca sativa
Manes.01G264404 Manihot esculenta
Manes.06G116500 Manihot esculenta
Manes.14G054500 Manihot esculenta
MBI14_g12740_MAGBIO Magnolia biondii
MD06G1148700 Malus domestica
MD14G1162500 Malus domestica
MD14G1162600 Malus domestica
Medtr3g075070 Medicago truncatula
MELO3C002344.2 Cucumis melo
Migut.D01234 Erythranthe guttata
Migut.I00490 Erythranthe guttata
MSTRG.22916 Avicennia marina
MSTRG.9316 Avicennia marina
Nitab4.5_0001664g0120 Nicotiana tabacum
Nitab4.5_0005327g0060 Nicotiana tabacum
Nn1g07595 Nelumbo nucifera
Nn1g07622 Nelumbo nucifera
Oeu006376.1 Olea europaea
Oeu023474.2 Olea europaea
Oeu055998.1 Olea europaea
Os06g0609800 Oryza sativa ssp. japonica
Peaxi162Scf00089g00324 Petunia axillaris
PGR044G0025 Punica granatum
PGSC0003DMG400015252 Solanum tuberosum
Phvul.009G168300 Phaseolus vulgaris
Potri.012G094200 Populus trichocarpa
Potri.015G091500 Populus trichocarpa
Prupe.5G155700 Prunus persica
Psat5g139920 Pisum sativum
PSO063G3591 Papaver somniferum
PSO782G5170 Papaver somniferum
QL10p004779 Quercus lobata
RcHm_v2.0_Chr1g0380401 Rosa chinensis
RcHm_v2.0_Chr7g0190821 Rosa chinensis
Rhsim12G0172400 Rhododendron simsii
Sabra12G0068800 Salix brachista
Sabra15G0113400 Salix brachista
SalBow1G4741 Salvia bowleyana
Sc04g0000850 Simmondsia chinensis
Sc22g0004140 Simmondsia chinensis
Sc22g0004150 Simmondsia chinensis
Sed0015656 Sechium edule
Sed0017473 Sechium edule
SEGI_11479 Sequoiadendron giganteum
SEGI_35854 Sequoiadendron giganteum
SEGI_40207 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14614 Striga asiatica
Solyc03g111030.3 Solanum lycopersicum
Sopen03g030200 Solanum pennellii
Sp6g12480 Schrenkiella parvula
TAR626G1948 Trochodendron aralioides
THA.LOC104803143 Tarenaya hassleriana
THA.LOC104825006 Tarenaya hassleriana
Thecc.03G124400 Theobroma cacao
Thhalv10013029m.g Eutrema salsugineum
TPR.G26139 Trifolium pratense
TWI14G0969 Tripterygium wilfordii
TWI23G0187 Tripterygium wilfordii
unitig_22.g5764 Utricularia gibba
vmacro16655 Vaccinium macrocarpon
vmacro16712 Vaccinium macrocarpon
vmacro16713 Vaccinium macrocarpon
VMungo1309G2768 Vigna mungo
Zm00001eb388520 Zea mays

User provided reference genes

Program Settings