Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p58570 Brassica napus
Aa31LG8G17060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.197 Anthoceros agrestis
Actinidia07405 Actinidia chinensis
Actinidia32673 Actinidia chinensis
Ah.07g205470 Amaranthus hybridus
AL7G23470 Arabidopsis lyrata
Aqoxy7G01583 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7WD3SA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LW2ZPS Arachis hypogaea
AT4G28990 Arabidopsis thaliana
ATR0315G038 Amborella trichopoda
Atru.chr7.1371 Acer truncatum
AUR62010955 Chenopodium quinoa
AUR62021464 Chenopodium quinoa
BcaC08g47141 Brassica carinata
BcaC09g51675 Brassica carinata
BcaNung00440 Brassica carinata
BcaNung00443 Brassica carinata
BcaNung01339 Brassica carinata
BcaNung02893 Brassica carinata
BolC7t46134H Brassica oleracea
BraA03t14917Z Brassica rapa
C07p56560 Brassica napus
CAN.G148.5 Capsicum annuum
CANSAT02G0006 Cannabis sativa
CARHR236720 Cardamine hirsuta
Carub.0007s1165 Capsella rubella
Ca_25539_v3 Cicer arietinum L.
CBR_g44542 Chara braunii
Cc06_g09930 Coffea canephora
Cc06_g09940 Coffea canephora
CDE05G1480 Ceratophyllum demersum
CDE05G2615 Ceratophyllum demersum
Cfa003235 Carpinus fangiana
Ciclev10008655m.g Citrus clementina
CiPaw.03G229100 Carya illinoinensis
CiPaw.04G162600 Carya illinoinensis
ClCG06G008760 Citrullus lanatus
COL.COLO4_34822 Corchorus olitorius
COL.COLO4_34823 Corchorus olitorius
Cpa.g.sc23.79 Carica papaya
CsaV3_1G045730 Cucumis sativus L.
CSS0000167 Camellia sinensis var. sinensis
DCAR_028696 Daucus carota
Dinv36656 Davidia involucrata
Dinv36657 Davidia involucrata
Dinv41624 Davidia involucrata
Duzib150G0489 Durio zibethinus
Duzib168G0165 Durio zibethinus
ECA234G0189 Erigeron canadensis
EL10Ac6g14047 Beta vulgaris
EL10Ac8g18440 Beta vulgaris
Eucgr.C01267 Eucalyptus grandis
FAN19G0406 Fragaria x ananassa
FAN23G0542 Fragaria x ananassa
FAN26G2817 Fragaria x ananassa
FvH4_1g04330 Fragaria vesca
Glyma.07G084500 Glycine max
Glyma.09G192400 Glycine max
Gohir.A08G241800 Gossypium hirsutum
Gohir.D08G262600 Gossypium hirsutum
Gorai.004G280600 Gossypium raimondii
GSVIVG01015362001 Vitis vinifera
HanXRQChr10g0318661 Helianthus annuus
Haze_25771 Corylus avellana
Hma1.2p1_1151F.1_g261950 Hydrangea macrophylla
HPP92_000517 Vanilla planifolia
Hund09218 Selenicereus undatus
Lalb_Chr14g0371621 Lupinus albus
Lalb_Chr14g0371631 Lupinus albus
Lalb_Chr22g0352701 Lupinus albus
Lalb_Chr24g0397401 Lupinus albus
Lalb_Chr24g0397411 Lupinus albus
Lj2g0026530 Lotus japonicus
Lj7A655G38 Lonicera japonica
Lsat_1_v5_gn_5_102941 Lactuca sativa
Lsat_1_v5_gn_5_102961 Lactuca sativa
Manes.03G023100 Manihot esculenta
Mapoly0001s0121 Marchantia polymorpha
MBI04_g19180_MAGBIO Magnolia biondii
MBI14_g08031_MAGBIO Magnolia biondii
MD02G1042900 Malus domestica
MD15G1181500 Malus domestica
MD15G1181700 Malus domestica
Medtr6g087890 Medicago truncatula
MELO3C024688.2 Cucumis melo
Migut.K00501 Erythranthe guttata
MSTRG.10624 Avicennia marina
MSTRG.26360 Avicennia marina
Nitab4.5_0000010g0010 Nicotiana tabacum
Nitab4.5_0000952g0010 Nicotiana tabacum
Nn2g11677 Nelumbo nucifera
Nn3g18098 Nelumbo nucifera
Oeu002248.1 Olea europaea
Oeu064593.1 Olea europaea
Oeu064594.1 Olea europaea
Os02g0274700 Oryza sativa ssp. japonica
Os06g0332900 Oryza sativa ssp. japonica
Peaxi162Scf00031g00232 Petunia axillaris
PGR142G2557 Punica granatum
PGSC0003DMG400027426 Solanum tuberosum
Phvul.004G165700 Phaseolus vulgaris
Potri.006G160500 Populus trichocarpa
Potri.018G083100 Populus trichocarpa
Pp3c14_23580 Physcomitrium patens
Prupe.7G234000 Prunus persica
Psat1g044240 Pisum sativum
PSO566G0157 Papaver somniferum
PSO782G4531 Papaver somniferum
QL02p045925 Quercus lobata
RcHm_v2.0_Chr2g0088791 Rosa chinensis
RcHm_v2.0_Chr2g0089981 Rosa chinensis
Rhsim03G0240000 Rhododendron simsii
Sabra06G0124000 Salix brachista
Sabra18G0070900 Salix brachista
Sc18g0001310 Simmondsia chinensis
Sed0015833 Sechium edule
Sed0026603 Sechium edule
SEGI_01979 Sequoiadendron giganteum
SEGI_18875 Sequoiadendron giganteum
SEGI_26024 Sequoiadendron giganteum
SGA_v2.0_scaffold92G28280 Striga asiatica
SMO116G0230 Selaginella moellendorffii
SMO169G0168 Selaginella moellendorffii
Solyc05g018340.4 Solanum lycopersicum
Sopen05g015140 Solanum pennellii
Sp7g26930 Schrenkiella parvula
TAR624G0612 Trochodendron aralioides
THA.LOC104804022 Tarenaya hassleriana
THA.LOC104820053 Tarenaya hassleriana
Thecc.09G107100 Theobroma cacao
Thhalv10025603m.g Eutrema salsugineum
TPR.G10049 Trifolium pratense
TWI23G1143 Tripterygium wilfordii
unitig_0.g2554 Utricularia gibba
vmacro06229 Vaccinium macrocarpon
VMungo0464G0467 Vigna mungo
Zm00001eb147430 Zea mays

User provided reference genes

Program Settings