Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p00500 Brassica napus
Aa31LG3G16700 Aethionema arabicum
Actinidia11441 Actinidia chinensis
AL6G20970 Arabidopsis lyrata
Aqoxy2G04162 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GC3WT6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GWB5D5 Arachis hypogaea
AT5G10460 Arabidopsis thaliana
ATR0743G005 Amborella trichopoda
Atru.BG.100.p Acer truncatum
Atru.chr4.1482 Acer truncatum
AUR62002417 Chenopodium quinoa
AUR62021707 Chenopodium quinoa
AUR62023772 Chenopodium quinoa
BcaB05g21485 Brassica carinata
BcaC03g13313 Brassica carinata
BolC2t06408H Brassica oleracea
BraA02t05034Z Brassica rapa
C02p04480 Brassica napus
CAN.G12630.1 Capsicum annuum
CAN.G1565.3 Capsicum annuum
CAN.G1579.15 Capsicum annuum
CAN.G1703.15 Capsicum annuum
CAN.G1703.16 Capsicum annuum
CAN.G181.20 Capsicum annuum
CAN.G2075.11 Capsicum annuum
CAN.G2075.13 Capsicum annuum
CAN.G2107.3 Capsicum annuum
CAN.G2177.12 Capsicum annuum
CAN.G575.103 Capsicum annuum
CAN.G575.118 Capsicum annuum
CAN.G575.78 Capsicum annuum
CANSAT56G3287 Cannabis sativa
CARHR202830 Cardamine hirsuta
Carub.0006s0894 Capsella rubella
Ca_18624_v3 Cicer arietinum L.
Ca_18630_v3 Cicer arietinum L.
Cc00_g04390 Coffea canephora
Cc09_g04220 Coffea canephora
Cfa015273 Carpinus fangiana
Ciclev10021262m.g Citrus clementina
CiPaw.01G170000 Carya illinoinensis
ClCG08G010170 Citrullus lanatus
COL.COLO4_08197 Corchorus olitorius
Cpa.g.sc343.3 Carica papaya
Cre14.g609300 Chlamydomonas reinhardtii
CsaV3_6G032350 Cucumis sativus L.
CSS0028849 Camellia sinensis var. sinensis
CSS0036954 Camellia sinensis var. sinensis
DCAR_005450 Daucus carota
Dinv33223 Davidia involucrata
Duzib151G0764 Durio zibethinus
ECA238G0802 Erigeron canadensis
EL10Ac3g06111 Beta vulgaris
EL10Ac7g16782 Beta vulgaris
Eucgr.G01603 Eucalyptus grandis
Eucgr.L00024 Eucalyptus grandis
FAN23G0174 Fragaria x ananassa
FAN26G1480 Fragaria x ananassa
FAN28G1408 Fragaria x ananassa
FvH4_1g00490 Fragaria vesca
Glyma.02G138700 Glycine max
Glyma.07G206300 Glycine max
Gohir.A10G146000 Gossypium hirsutum
Gohir.D10G121000 Gossypium hirsutum
Gorai.004G148900 Gossypium raimondii
Gorai.011G132900 Gossypium raimondii
GSVIVG01038190001 Vitis vinifera
HanXRQChr10g0285921 Helianthus annuus
Haze_01354 Corylus avellana
HPP92_011686 Vanilla planifolia
HPP92_011691 Vanilla planifolia
Hund12358 Selenicereus undatus
Lalb_Chr16g0384361 Lupinus albus
Lj4g0013603 Lotus japonicus
Lj6A192T18 Lonicera japonica
Lj6A193T36 Lonicera japonica
Lj6A199G41 Lonicera japonica
Lj6A203G20 Lonicera japonica
Lj6A203T27 Lonicera japonica
Lj6A230T44 Lonicera japonica
Lj6A58T47 Lonicera japonica
Lj6A58T48 Lonicera japonica
Lj6C203G2 Lonicera japonica
Lj6C227G7 Lonicera japonica
Lsat_1_v5_gn_2_40261 Lactuca sativa
Manes.05G132000 Manihot esculenta
MCO04G248 Micromonas commoda
MD15G1148400 Malus domestica
Medtr4g087590 Medicago truncatula
Medtr4g087600 Medicago truncatula
MELO3C011447.2 Cucumis melo
Migut.F01838 Erythranthe guttata
MSTRG.8188 Avicennia marina
Nitab4.5_0000241g0250 Nicotiana tabacum
Nitab4.5_0001936g0090 Nicotiana tabacum
Nitab4.5_0002604g0050 Nicotiana tabacum
Nitab4.5_0008882g0020 Nicotiana tabacum
Nn7g37504 Nelumbo nucifera
Oeu057533.3 Olea europaea
Os08g0542600 Oryza sativa ssp. japonica
Peaxi162Scf00544g00117 Petunia axillaris
Peaxi162Scf00544g00118 Petunia axillaris
PGR042G2305 Punica granatum
PGSC0003DMG400004444 Solanum tuberosum
Phvul.003G059600 Phaseolus vulgaris
Potri.019G099100 Populus trichocarpa
PRCOL_00005454 Prasinoderma coloniale
Prupe.7G267200 Prunus persica
Psat7g119320 Pisum sativum
PSO541G5416 Papaver somniferum
PSO675G7310 Papaver somniferum
QL10p057421 Quercus lobata
QL10p057731 Quercus lobata
RcHm_v2.0_Chr2g0085051 Rosa chinensis
RcHm_v2.0_Chr2g0085091 Rosa chinensis
Rhsim02G0085900 Rhododendron simsii
RhsimUnG0015400 Rhododendron simsii
Sabra19G0110200 Salix brachista
SalBow3G2273 Salvia bowleyana
Sc19g0006410 Simmondsia chinensis
Sed0010820 Sechium edule
Sed0015185 Sechium edule
SEGI_26385 Sequoiadendron giganteum
SGA_v2.0_scaffold122G33215 Striga asiatica
SHI25987 Sapria himalayana
SMO119G0305 Selaginella moellendorffii
Solyc12g038820.1 Solanum lycopersicum
Sopen12g019010 Solanum pennellii
Sp6g32980 Schrenkiella parvula
TAR362G0948 Trochodendron aralioides
THA.LOC104801693 Tarenaya hassleriana
Thecc.04G162400 Theobroma cacao
Thhalv10014198m.g Eutrema salsugineum
TPR.G23516 Trifolium pratense
TWI38G0850 Tripterygium wilfordii
vmacro15699 Vaccinium macrocarpon
VMungo0251G3259 Vigna mungo
Zm00001eb037350 Zea mays

User provided reference genes

Program Settings