Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p32370 Brassica napus
Aa31LG5G10870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2497 Anthoceros agrestis
Actinidia05936 Actinidia chinensis
Actinidia36173 Actinidia chinensis
Ah.00g000560 Amaranthus hybridus
AL3G10400 Arabidopsis lyrata
AL6G24990 Arabidopsis lyrata
Aqoxy3G01444 Aquilegia oxysepala
Aqoxy5G03538 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.C4BPDT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JB8R4I Arachis hypogaea
AT3G01740 Arabidopsis thaliana
AT5G14290 Arabidopsis thaliana
ATR1098G108 Amborella trichopoda
Atru.chr6.2492 Acer truncatum
AUR62013851 Chenopodium quinoa
AUR62036750 Chenopodium quinoa
BolC3t16211H Brassica oleracea
BraA03t12407Z Brassica rapa
C03p39430 Brassica napus
CAN.G905.22 Capsicum annuum
CANSAT11G2604 Cannabis sativa
CARHR075180 Cardamine hirsuta
CARHR105740 Cardamine hirsuta
CARHR199040 Cardamine hirsuta
CARHR266370 Cardamine hirsuta
Carub.0003s0032 Capsella rubella
Ca_25364_v3 Cicer arietinum L.
CBR_g38683 Chara braunii
Cc07_g00480 Coffea canephora
Cc10_g08070 Coffea canephora
Cfa007270 Carpinus fangiana
Ciclev10017154m.g Citrus clementina
CiPaw.03G051000 Carya illinoinensis
ClCG04G001400 Citrullus lanatus
COL.COLO4_29287 Corchorus olitorius
Cpa.g.sc130.24 Carica papaya
Cre12.g546000 Chlamydomonas reinhardtii
CsaV3_4G031040 Cucumis sativus L.
CSS0020557 Camellia sinensis var. sinensis
DCAR_011296 Daucus carota
Dinv33378 Davidia involucrata
Duzib187G1007 Durio zibethinus
Duzib264G0656 Durio zibethinus
ECA238G0236 Erigeron canadensis
EL10Ac2g02820 Beta vulgaris
Eucgr.J02294 Eucalyptus grandis
FAN02G3728 Fragaria x ananassa
FAN05G0237 Fragaria x ananassa
FAN05G1403 Fragaria x ananassa
FAN05G2282 Fragaria x ananassa
FAN05G4095 Fragaria x ananassa
FAN09G0379 Fragaria x ananassa
FAN12G0501 Fragaria x ananassa
FAN14G1883 Fragaria x ananassa
FAN14G2627 Fragaria x ananassa
FAN14G4216 Fragaria x ananassa
FAN21G0236 Fragaria x ananassa
FvH4_4g13440 Fragaria vesca
FvH4_6g02050 Fragaria vesca
Glyma.05G073700 Glycine max
Glyma.19G077100 Glycine max
Gohir.1Z049635 Gossypium hirsutum
Gohir.A05G341200 Gossypium hirsutum
Gohir.A10G160300 Gossypium hirsutum
Gohir.D04G079400 Gossypium hirsutum
Gohir.D10G084868 Gossypium hirsutum
Gorai.011G092800 Gossypium raimondii
Gorai.012G089400 Gossypium raimondii
HanXRQChr01g0030421 Helianthus annuus
Haze_14820 Corylus avellana
Hma1.2p1_0279F.1_g112320 Hydrangea macrophylla
HPP92_006243 Vanilla planifolia
Hund13392 Selenicereus undatus
Lalb_Chr02g0157891 Lupinus albus
Lalb_Chr21g0317581 Lupinus albus
Lj6g0007933 Lotus japonicus
Lsat_1_v5_gn_3_10761 Lactuca sativa
Manes.15G156800 Manihot esculenta
Mapoly0005s0032 Marchantia polymorpha
MBI11_g21381_MAGBIO Magnolia biondii
MCO16G647 Micromonas commoda
Medtr4g073700 Medicago truncatula
Medtr6g078300 Medicago truncatula
MELO3C008981.2 Cucumis melo
Migut.K01440 Erythranthe guttata
MSTRG.3267 Avicennia marina
Nitab4.5_0000743g0030 Nicotiana tabacum
Nitab4.5_0003764g0020 Nicotiana tabacum
Nitab4.5_0012484g0010 Nicotiana tabacum
Nn1g08773 Nelumbo nucifera
Nn4g24319 Nelumbo nucifera
Oeu003270.1 Olea europaea
Os12g0244200 Oryza sativa ssp. japonica
Peaxi162Scf00016g00048 Petunia axillaris
PGSC0003DMG400016154 Solanum tuberosum
PGSC0003DMG400023637 Solanum tuberosum
Phvul.003G138900 Phaseolus vulgaris
Phvul.003G139152 Phaseolus vulgaris
Phvul.003G262000 Phaseolus vulgaris
Potri.001G335600 Populus trichocarpa
Pp3c26_11040 Physcomitrium patens
PRCOL_00001894 Prasinoderma coloniale
Prupe.6G125800 Prunus persica
Psat1g031800 Pisum sativum
Psat7g172960 Pisum sativum
PSO478G5160 Papaver somniferum
PSO782G2325 Papaver somniferum
PSO782G3924 Papaver somniferum
QL02p072772 Quercus lobata
QL05p048106 Quercus lobata
RcHm_v2.0_Chr3g0449841 Rosa chinensis
Rhsim10G0010400 Rhododendron simsii
Sabra16G0216600 Salix brachista
SalBow7G4317 Salvia bowleyana
Sc10g0004570 Simmondsia chinensis
Sed0018883 Sechium edule
Sed0019428 Sechium edule
SEGI_30393 Sequoiadendron giganteum
SGA_v2.0_scaffold47G17558 Striga asiatica
SHI11403 Sapria himalayana
SMO164G0004 Selaginella moellendorffii
Solyc11g010180.2 Solanum lycopersicum
Sopen11g004960 Solanum pennellii
Sp3g00320 Schrenkiella parvula
TAR371G0544 Trochodendron aralioides
TAR374G0914 Trochodendron aralioides
TAR629G1334 Trochodendron aralioides
THA.LOC104822403 Tarenaya hassleriana
Thecc.04G028500 Theobroma cacao
Thhalv10014999m.g Eutrema salsugineum
Thhalv10021760m.g Eutrema salsugineum
TPR.G3708 Trifolium pratense
TWI36G0940 Tripterygium wilfordii
TWI56G1275 Tripterygium wilfordii
unitig_32.g10669 Utricularia gibba
VMungo0464G1619 Vigna mungo
Zm00001eb328460 Zea mays

User provided reference genes

Program Settings