Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p02410 Brassica napus
A06p04520 Brassica napus
A08p04780 Brassica napus
Aa31LG10G5410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2340 Anthoceros agrestis
Actinidia04610 Actinidia chinensis
Actinidia33011 Actinidia chinensis
Actinidia35901 Actinidia chinensis
Ah.13g073090 Amaranthus hybridus
AL1G54950 Arabidopsis lyrata
Aqoxy5G02875 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.47CT68 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7J6TQU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9LP875 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C7LR0V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U7ILUP Arachis hypogaea
AT1G48350 Arabidopsis thaliana
AT3G17626 Arabidopsis thaliana
ATR0561G067 Amborella trichopoda
Atru.chr4.3197 Acer truncatum
AUR62002518 Chenopodium quinoa
AUR62023677 Chenopodium quinoa
BcaB04g17437 Brassica carinata
BcaC07g37142 Brassica carinata
BolC8t47325H Brassica oleracea
BraA08t32508Z Brassica rapa
BraA09t40268Z Brassica rapa
C08p05150 Brassica napus
C09p43950 Brassica napus
CAN.G484.95 Capsicum annuum
CANSAT01G2767 Cannabis sativa
CARHR037960 Cardamine hirsuta
Carub.0001s3747 Capsella rubella
Ca_02315_v3 Cicer arietinum L.
CBR_g48702 Chara braunii
Cc04_g13640 Coffea canephora
CDE02G3134 Ceratophyllum demersum
CDE11G0957 Ceratophyllum demersum
Cfa015763 Carpinus fangiana
Ciclev10022561m.g Citrus clementina
CiPaw.02G068300 Carya illinoinensis
ClCG05G007000 Citrullus lanatus
COL.COLO4_35587 Corchorus olitorius
Cpa.g.sc146.3 Carica papaya
Cre01.g052100 Chlamydomonas reinhardtii
CsaV3_3G015690 Cucumis sativus L.
CSS0009878 Camellia sinensis var. sinensis
CSS0010244 Camellia sinensis var. sinensis
CSS0024695 Camellia sinensis var. sinensis
DCAR_026923 Daucus carota
Dinv26490 Davidia involucrata
Duzib177G0638 Durio zibethinus
Duzib251G0959 Durio zibethinus
ECA234G1716 Erigeron canadensis
EL10Ac3g06214 Beta vulgaris
Eucgr.B02183 Eucalyptus grandis
Eucgr.L01079 Eucalyptus grandis
FAN07G0874 Fragaria x ananassa
FAN12G1024 Fragaria x ananassa
FAN17G0375 Fragaria x ananassa
FvH4_4g21870 Fragaria vesca
Glyma.09G077600 Glycine max
Glyma.15G185000 Glycine max
Gohir.A08G081800 Gossypium hirsutum
Gohir.D08G091100 Gossypium hirsutum
Gorai.004G096600 Gossypium raimondii
GSVIVG01017720001 Vitis vinifera
HanXRQChr10g0290461 Helianthus annuus
HanXRQChr16g0513961 Helianthus annuus
Haze_00740 Corylus avellana
Haze_27388 Corylus avellana
Hma1.2p1_0050F.1_g029170 Hydrangea macrophylla
HPP92_026860 Vanilla planifolia
Hund12271 Selenicereus undatus
Hund12272 Selenicereus undatus
Lalb_Chr08g0232951 Lupinus albus
Lalb_Chr11g0073801 Lupinus albus
Lj3A842T60 Lonicera japonica
Lj6g0020934 Lotus japonicus
Lsat_1_v5_gn_5_109481 Lactuca sativa
Manes.01G048400 Manihot esculenta
Mapoly0060s0071 Marchantia polymorpha
MBI18_g28932_MAGBIO Magnolia biondii
MCO16G312 Micromonas commoda
MD13G1136100 Malus domestica
MD16G1131500 Malus domestica
Medtr2g044920 Medicago truncatula
MELO3C006766.2 Cucumis melo
MSTRG.28074 Avicennia marina
Nitab4.5_0000978g0010 Nicotiana tabacum
Nitab4.5_0003998g0040 Nicotiana tabacum
Nn1g06332 Nelumbo nucifera
Nn1g08285 Nelumbo nucifera
Nn2g14382 Nelumbo nucifera
Nn3g20978 Nelumbo nucifera
Nn5g29782 Nelumbo nucifera
Nn6g34060 Nelumbo nucifera
Oeu047569.1 Olea europaea
Oeu063165.1 Olea europaea
Oeu063167.2 Olea europaea
Os03g0828100 Oryza sativa ssp. japonica
Peaxi162Scf00323g00929 Petunia axillaris
PGR004G2778 Punica granatum
PGSC0003DMG400004682 Solanum tuberosum
Phvul.009G221700 Phaseolus vulgaris
Potri.010G005000 Populus trichocarpa
Pp3c11_5070 Physcomitrium patens
Pp3c1_1240 Physcomitrium patens
Pp3c1_8470 Physcomitrium patens
Pp3c7_24650 Physcomitrium patens
PRCOL_00000393 Prasinoderma coloniale
Prupe.1G209300 Prunus persica
Psat1g016560 Pisum sativum
PSO170G2754 Papaver somniferum
PSO357G0664 Papaver somniferum
QL06p014840 Quercus lobata
RcHm_v2.0_Chr4g0428131 Rosa chinensis
Rhsim09G0032900 Rhododendron simsii
Sabra10G0004200 Salix brachista
Sc25g0002370 Simmondsia chinensis
Sed0015702 Sechium edule
Sed0019465 Sechium edule
SEGI_13687 Sequoiadendron giganteum
SEGI_23609 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02973 Striga asiatica
SMO347G0648 Selaginella moellendorffii
Solyc12g098890.2 Solanum lycopersicum
Sopen12g033640 Solanum pennellii
Sp1g35300 Schrenkiella parvula
TAR362G1223 Trochodendron aralioides
TAR633G1063 Trochodendron aralioides
THA.LOC104821817 Tarenaya hassleriana
Thecc.09G200200 Theobroma cacao
Thhalv10011822m.g Eutrema salsugineum
TPR.G18013 Trifolium pratense
unitig_22.g5836 Utricularia gibba
vmacro00585 Vaccinium macrocarpon
VMungo1309G3094 Vigna mungo
Zm00001eb063340 Zea mays

User provided reference genes

Program Settings