Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p33690 Brassica napus
A05p27490 Brassica napus
Aa31LG8G7890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2001 Anthoceros agrestis
Actinidia00637 Actinidia chinensis
Actinidia31136 Actinidia chinensis
Ah.15g094670 Amaranthus hybridus
AL3G35200 Arabidopsis lyrata
Aqoxy7G03200 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5V72PU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PDFG4L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S1MR2L Arachis hypogaea
AT3G21200 Arabidopsis thaliana
ATR0580G202 Amborella trichopoda
Atru.chr1.2698 Acer truncatum
AUR62025582 Chenopodium quinoa
BcaB04g20605 Brassica carinata
BcaB06g26202 Brassica carinata
BcaC05g28263 Brassica carinata
BcaC09g49056 Brassica carinata
BcaNung05297 Brassica carinata
BolC1t04253H Brassica oleracea
BolC5t32978H Brassica oleracea
BraA01t03481Z Brassica rapa
BraA05t21640Z Brassica rapa
C01p43060 Brassica napus
C05p42580 Brassica napus
CAN.G790.23 Capsicum annuum
CANSAT01G1753 Cannabis sativa
CARHR097080 Cardamine hirsuta
Carub.0003s2116 Capsella rubella
Ca_20955_v3 Cicer arietinum L.
CBR_g22384 Chara braunii
Cc04_g00370 Coffea canephora
CDE02G1684 Ceratophyllum demersum
CDE05G1859 Ceratophyllum demersum
Cfa005563 Carpinus fangiana
Ciclev10026115m.g Citrus clementina
CiPaw.02G049600 Carya illinoinensis
ClCG05G003150 Citrullus lanatus
COL.COLO4_31205 Corchorus olitorius
Cpa.g.c36201.2 Carica papaya
Cpa.g.c38087 Carica papaya
Cre03.g156600 Chlamydomonas reinhardtii
CsaV3_3G010770 Cucumis sativus L.
CsaV3_3G010780 Cucumis sativus L.
CSS0040638 Camellia sinensis var. sinensis
DCAR_007669 Daucus carota
Dinv20356 Davidia involucrata
Duzib192G0032 Durio zibethinus
ECA232G0321 Erigeron canadensis
EL10Ac7g18224 Beta vulgaris
Eucgr.F04012 Eucalyptus grandis
FAN02G3895 Fragaria x ananassa
FAN09G1743 Fragaria x ananassa
FAN14G5581 Fragaria x ananassa
FvH4_6g37280 Fragaria vesca
Glyma.08G222600 Glycine max
Glyma.14G098400 Glycine max
Gohir.A05G114100 Gossypium hirsutum
Gohir.D01G106333 Gossypium hirsutum
Gohir.D01G126833 Gossypium hirsutum
Gohir.D05G114500 Gossypium hirsutum
Gohir.D06G077900 Gossypium hirsutum
Gorai.002G130400 Gossypium raimondii
Gorai.002G157400 Gossypium raimondii
Gorai.003G079200 Gossypium raimondii
Gorai.009G118600 Gossypium raimondii
Gorai.012G122800 Gossypium raimondii
Gorai.013G054800 Gossypium raimondii
GSVIVG01016137001 Vitis vinifera
HanXRQChr09g0277401 Helianthus annuus
Haze_10760 Corylus avellana
Haze_10762 Corylus avellana
Haze_10765 Corylus avellana
HPP92_013427 Vanilla planifolia
Hund18611 Selenicereus undatus
Lalb_Chr04g0264721 Lupinus albus
Lj3g0002967 Lotus japonicus
Lj6A3G42 Lonicera japonica
Lj6C21T3 Lonicera japonica
Lsat_1_v5_gn_4_88641 Lactuca sativa
Manes.16G045400 Manihot esculenta
Mapoly0005s0279 Marchantia polymorpha
MBI14_g30702_MAGBIO Magnolia biondii
MCO13G019 Micromonas commoda
MD09G1158800 Malus domestica
MD17G1145100 Malus domestica
Medtr3g006055 Medicago truncatula
Medtr4g005800 Medicago truncatula
Medtr4g006200 Medicago truncatula
Medtr6g087945 Medicago truncatula
MELO3C006296.2 Cucumis melo
Migut.D00894 Erythranthe guttata
MSTRG.4527 Avicennia marina
Nitab4.5_0001691g0110 Nicotiana tabacum
Nitab4.5_0002885g0050 Nicotiana tabacum
Nn1g03159 Nelumbo nucifera
Nn2g12576 Nelumbo nucifera
Nn6g35127 Nelumbo nucifera
Oeu023761.1 Olea europaea
Peaxi162Scf00038g02533 Petunia axillaris
PGR102G1295 Punica granatum
PGSC0003DMG400009162 Solanum tuberosum
Phvul.008G255600 Phaseolus vulgaris
Potri.008G008801 Populus trichocarpa
Potri.010G250200 Populus trichocarpa
Pp3c11_26760 Physcomitrium patens
Pp3c7_5080 Physcomitrium patens
PRCOL_00005430 Prasinoderma coloniale
Prupe.3G167000 Prunus persica
Psat7g263520 Pisum sativum
PSO063G4509 Papaver somniferum
PSO782G2961 Papaver somniferum
RcHm_v2.0_Chr2g0150111 Rosa chinensis
Rhsim12G0214300 Rhododendron simsii
Sabra10G0194700 Salix brachista
SalBow7G0632 Salvia bowleyana
Sc15g0000930 Simmondsia chinensis
Sed0002659 Sechium edule
Sed0027406 Sechium edule
SEGI_00240 Sequoiadendron giganteum
SEGI_08052 Sequoiadendron giganteum
SGA_v2.0_scaffold4G02103 Striga asiatica
SGA_v2.0_scaffold68G22804 Striga asiatica
SMO146G0309 Selaginella moellendorffii
Solyc03g123880.3 Solanum lycopersicum
Sopen03g041620 Solanum pennellii
Sp3g19180 Schrenkiella parvula
TAR383G0879 Trochodendron aralioides
THA.LOC104817926 Tarenaya hassleriana
Thecc.06G064400 Theobroma cacao
Thhalv10021146m.g Eutrema salsugineum
Thhalv10021148m.g Eutrema salsugineum
TPR.G38706 Trifolium pratense
TWI18G1464 Tripterygium wilfordii
vmacro17061 Vaccinium macrocarpon
VMungo0647G0411 Vigna mungo
Zm00001eb170870 Zea mays
Zm00001eb319280 Zea mays

User provided reference genes

Program Settings