Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p23180 Brassica napus
Aa31LG6G9070 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2049 Anthoceros agrestis
Actinidia29431 Actinidia chinensis
AL1G51120 Arabidopsis lyrata
Aqoxy5G02479 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.204R5H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.64ZY3M Arachis hypogaea
AT1G36980 Arabidopsis thaliana
ATR0121G008 Amborella trichopoda
Atru.chr13.1318 Acer truncatum
Atru.chr13.1362 Acer truncatum
AUR62004694 Chenopodium quinoa
BcaB03g13640 Brassica carinata
BcaC05g27681 Brassica carinata
BcaC05g27682 Brassica carinata
BolC5t32398H Brassica oleracea
BraA05t21185Z Brassica rapa
BraA09t38758Z Brassica rapa
C05p36620 Brassica napus
C05p36630 Brassica napus
C05p36640 Brassica napus
CAN.G255.20 Capsicum annuum
CANSAT25G2554 Cannabis sativa
CARHR034780 Cardamine hirsuta
Carub.0001s3388 Capsella rubella
Ca_25761_v3 Cicer arietinum L.
CBR_g30829 Chara braunii
Cc10_g10440 Coffea canephora
CDE06G1809 Ceratophyllum demersum
Cfa015959 Carpinus fangiana
Ciclev10002818m.g Citrus clementina
CiPaw.05G228700 Carya illinoinensis
ClCG03G009110 Citrullus lanatus
ClCG03G009140 Citrullus lanatus
COL.COLO4_32811 Corchorus olitorius
Cre01.g042950 Chlamydomonas reinhardtii
Cre03.g159300 Chlamydomonas reinhardtii
CsaV3_5G023520 Cucumis sativus L.
DCAR_014792 Daucus carota
DCAR_023128 Daucus carota
Dinv26716 Davidia involucrata
Dinv27383 Davidia involucrata
Duzib041G0073 Durio zibethinus
Duzib093G1687 Durio zibethinus
ECA232G0625 Erigeron canadensis
EL10Ac1g00039 Beta vulgaris
Eucgr.F04378 Eucalyptus grandis
FAN04G1587 Fragaria x ananassa
FAN08G2064 Fragaria x ananassa
FAN13G3020 Fragaria x ananassa
FAN18G3455 Fragaria x ananassa
FvH4_5g38950 Fragaria vesca
Glyma.04G253700 Glycine max
Glyma.06G108600 Glycine max
Gohir.A01G187700 Gossypium hirsutum
Gohir.A02G075000 Gossypium hirsutum
Gohir.A06G041000 Gossypium hirsutum
Gohir.D01G181900 Gossypium hirsutum
Gohir.D02G082100 Gossypium hirsutum
Gohir.D06G041900 Gossypium hirsutum
Gorai.002G220400 Gossypium raimondii
Gorai.005G092000 Gossypium raimondii
Gorai.010G047100 Gossypium raimondii
GSVIVG01008943001 Vitis vinifera
HanXRQChr09g0260151 Helianthus annuus
HanXRQChr11g0326271 Helianthus annuus
Haze_00523 Corylus avellana
Hma1.2p1_0221F.1_g093180 Hydrangea macrophylla
HPP92_002297 Vanilla planifolia
HPP92_005944 Vanilla planifolia
Hund16821 Selenicereus undatus
Lalb_Chr08g0241711 Lupinus albus
Lalb_Chr11g0065701 Lupinus albus
Lj1g0000272 Lotus japonicus
Lsat_1_v5_gn_4_135561 Lactuca sativa
Manes.18G073000 Manihot esculenta
Mapoly0004s0020 Marchantia polymorpha
MBI06_g01046_MAGBIO Magnolia biondii
MD15G1359200 Malus domestica
Medtr3g073300 Medicago truncatula
MELO3C022783.2 Cucumis melo
Migut.C01190 Erythranthe guttata
Migut.N03320 Erythranthe guttata
MSTRG.1486 Avicennia marina
Nitab4.5_0000051g0120 Nicotiana tabacum
Nitab4.5_0002332g0020 Nicotiana tabacum
Nn1g08538 Nelumbo nucifera
Nn2g15248 Nelumbo nucifera
Nn5g27958 Nelumbo nucifera
Oeu032962.1 Olea europaea
Oeu043793.1 Olea europaea
Oeu050268.1 Olea europaea
Os02g0566900 Oryza sativa ssp. japonica
Os08g0469200 Oryza sativa ssp. japonica
Os09g0453000 Oryza sativa ssp. japonica
Peaxi162Scf01011g00023 Petunia axillaris
PGR044G1289 Punica granatum
PGSC0003DMG400027793 Solanum tuberosum
Phvul.011G165300 Phaseolus vulgaris
Potri.002G089300 Populus trichocarpa
Potri.005G171901 Populus trichocarpa
Pp3c1_10200 Physcomitrium patens
Pp3c2_28270 Physcomitrium patens
PRCOL_00003843 Prasinoderma coloniale
Prupe.1G506000 Prunus persica
Psat5g135600 Pisum sativum
PSO017G5790 Papaver somniferum
PSO170G3859 Papaver somniferum
QL12p035283 Quercus lobata
RcHm_v2.0_Chr7g0240921 Rosa chinensis
Rhsim06G0109100 Rhododendron simsii
Sabra02G0070300 Salix brachista
Sabra05G0129400 Salix brachista
SalBow1G3581 Salvia bowleyana
SalBow7G4082 Salvia bowleyana
Sc01g0001550 Simmondsia chinensis
Sed0015736 Sechium edule
SEGI_34511 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32436 Striga asiatica
SGA_v2.0_scaffold24G10504 Striga asiatica
SMO116G0262 Selaginella moellendorffii
Solyc11g013550.2 Solanum lycopersicum
Solyc11g013660.1 Solanum lycopersicum
Sopen11g008580 Solanum pennellii
Sp1g31180 Schrenkiella parvula
TAR127G0005 Trochodendron aralioides
TAR161G0001 Trochodendron aralioides
TAR197G0004 Trochodendron aralioides
TAR628G1556 Trochodendron aralioides
THA.LOC104806808 Tarenaya hassleriana
THA.LOC104813132 Tarenaya hassleriana
Thecc.08G116800 Theobroma cacao
Thhalv10005115m.g Eutrema salsugineum
TPR.G32948 Trifolium pratense
TWI12G0464 Tripterygium wilfordii
TWI56G0906 Tripterygium wilfordii
VMungo1127G1458 Vigna mungo
Zm00001eb100550 Zea mays
Zm00001eb244520 Zea mays

User provided reference genes

Program Settings