Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p33420 Brassica napus
A05p04790 Brassica napus
Aa31LG1G26190 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3656 Anthoceros agrestis
Actinidia21613 Actinidia chinensis
AL4G43700 Arabidopsis lyrata
AL5G42420 Arabidopsis lyrata
Aqoxy3G02564 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L23YUH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LT98XL Arachis hypogaea
AT2G44650 Arabidopsis thaliana
AT3G60210 Arabidopsis thaliana
ATR0665G403 Amborella trichopoda
Atru.chr5.44 Acer truncatum
Atru.chr5.75 Acer truncatum
AUR62013788 Chenopodium quinoa
AUR62023368 Chenopodium quinoa
BcaB02g08840 Brassica carinata
BcaB06g29391 Brassica carinata
BcaC02g07105 Brassica carinata
BcaC02g12287 Brassica carinata
BolC4t22190H Brassica oleracea
BolC4t28620H Brassica oleracea
BraA04t18803Z Brassica rapa
BraA05t19455Z Brassica rapa
C04p05600 Brassica napus
C04p71170 Brassica napus
CAN.G756.18 Capsicum annuum
CANSAT25G0013 Cannabis sativa
CARHR139860 Cardamine hirsuta
Carub.0004s2720 Capsella rubella
Carub.0005s2695 Capsella rubella
Ca_23141_v3 Cicer arietinum L.
Cc02_g25610 Coffea canephora
CDE04G3246 Ceratophyllum demersum
CDE12G0168 Ceratophyllum demersum
Cfa011024 Carpinus fangiana
Ciclev10022799m.g Citrus clementina
CiPaw.13G022100 Carya illinoinensis
CiPaw.14G016900 Carya illinoinensis
ClCG05G002900 Citrullus lanatus
ClCG06G000860 Citrullus lanatus
COL.COLO4_12353 Corchorus olitorius
Cpa.g.sc52.71 Carica papaya
CsaV3_3G010440 Cucumis sativus L.
CsaV3_6G006710 Cucumis sativus L.
CSS0010758 Camellia sinensis var. sinensis
CSS0012976 Camellia sinensis var. sinensis
CSS0036750 Camellia sinensis var. sinensis
DCAR_025027 Daucus carota
Dinv43589 Davidia involucrata
Dinv44023 Davidia involucrata
Duzib133G1397 Durio zibethinus
Duzib138G1174 Durio zibethinus
ECA234G4156 Erigeron canadensis
EL10Ac1g00715 Beta vulgaris
Eucgr.D01184 Eucalyptus grandis
FAN01G0908 Fragaria x ananassa
FAN03G1834 Fragaria x ananassa
FAN06G3564 Fragaria x ananassa
FAN10G0732 Fragaria x ananassa
FAN10G4236 Fragaria x ananassa
FvH4_7g08830 Fragaria vesca
Glyma.03G103600 Glycine max
Glyma.07G120400 Glycine max
Gohir.A08G140700 Gossypium hirsutum
Gohir.D07G176200 Gossypium hirsutum
Gohir.D08G161700 Gossypium hirsutum
Gorai.004G168100 Gossypium raimondii
Gorai.007G266500 Gossypium raimondii
GSVIVG01018352001 Vitis vinifera
HanXRQChr16g0522961 Helianthus annuus
Haze_02901 Corylus avellana
HPP92_025708 Vanilla planifolia
Hund17125 Selenicereus undatus
Lalb_Chr03g0040501 Lupinus albus
Lalb_Chr19g0126481 Lupinus albus
Lj3g0015162 Lotus japonicus
Lsat_1_v5_gn_4_38520 Lactuca sativa
Manes.05G058400 Manihot esculenta
Mapoly0181s0002 Marchantia polymorpha
MD00G1150500 Malus domestica
MD02G1223400 Malus domestica
MD07G1091300 Malus domestica
MD13G1240800 Malus domestica
Medtr8g009280 Medicago truncatula
MELO3C006268.2 Cucumis melo
MELO3C022455.2 Cucumis melo
Migut.B01488 Erythranthe guttata
Migut.N01716 Erythranthe guttata
MSTRG.17108 Avicennia marina
Nitab4.5_0004088g0020 Nicotiana tabacum
Nitab4.5_0005064g0040 Nicotiana tabacum
Nn6g33696 Nelumbo nucifera
Oeu034855.1 Olea europaea
Os10g0566700 Oryza sativa ssp. japonica
Peaxi162Scf00745g00015 Petunia axillaris
PGR042G2970 Punica granatum
PGSC0003DMG400001718 Solanum tuberosum
Phvul.006G055900 Phaseolus vulgaris
Phvul.010G041700 Phaseolus vulgaris
Potri.002G135700 Populus trichocarpa
Potri.014G044300 Populus trichocarpa
Pp3c1_20880 Physcomitrium patens
Pp3c2_19170 Physcomitrium patens
PRCOL_00005742 Prasinoderma coloniale
Prupe.2G116500 Prunus persica
Psat0s4427g0080 Pisum sativum
PSO063G2958 Papaver somniferum
PSO782G2409 Papaver somniferum
QL04p026246 Quercus lobata
QL04p026254 Quercus lobata
RcHm_v2.0_Chr1g0344251 Rosa chinensis
Rhsim01G0143400 Rhododendron simsii
Rhsim03G0098500 Rhododendron simsii
Sabra02G0105500 Salix brachista
Sabra14G0032200 Salix brachista
SalBow5G2779 Salvia bowleyana
Sc26g0001760 Simmondsia chinensis
Sed0000336 Sechium edule
Sed0025787 Sechium edule
SEGI_24977 Sequoiadendron giganteum
SGA_v2.0_scaffold52G19266 Striga asiatica
SMO244G0054 Selaginella moellendorffii
Solyc01g088610.4 Solanum lycopersicum
Sopen01g035460 Solanum pennellii
Sp4g26730 Schrenkiella parvula
THA.LOC104827584 Tarenaya hassleriana
Thecc.01G402400 Theobroma cacao
Thhalv10001677m.g Eutrema salsugineum
TPR.G17350 Trifolium pratense
TWI14G1396 Tripterygium wilfordii
TWI23G0236 Tripterygium wilfordii
unitig_26.g8858 Utricularia gibba
unitig_750.g28406 Utricularia gibba
vmacro21078 Vaccinium macrocarpon
VMungo0331G0633 Vigna mungo
Zm00001eb024030 Zea mays
Zm00001eb071630 Zea mays
Zm00001eb390720 Zea mays

User provided reference genes

Program Settings